KEGG   PATHWAY: pruf00512
Entry
pruf00512                   Pathway                                
Name
Mucin type O-glycan biosynthesis - Pyrgilauda ruficollis (rufous-necked snowfinch)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
pruf00512  Mucin type O-glycan biosynthesis
pruf00512

Other DBs
GO: 0006493
Organism
Pyrgilauda ruficollis (rufous-necked snowfinch) [GN:pruf]
Gene
121348749  ST3GAL2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 isoform X1 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
121349532  GALNT16; polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
121352764  GALNT5; polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
121352968  C1GALT1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X1 [KO:K00731] [EC:2.4.1.122]
121352972  GALNT15; polypeptide N-acetylgalactosaminyltransferase 15 [KO:K00710] [EC:2.4.1.41]
121353451  GALNT13; polypeptide N-acetylgalactosaminyltransferase 13 [KO:K00710] [EC:2.4.1.41]
121354316  GALNT2; polypeptide N-acetylgalactosaminyltransferase 2 [KO:K00710] [EC:2.4.1.41]
121354472  GCNT3; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 [KO:K09662] [EC:2.4.1.-]
121355271  GALNT6; polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
121356355  [KO:K00731] [EC:2.4.1.122]
121356651  GALNT3; polypeptide N-acetylgalactosaminyltransferase 3 [KO:K00710] [EC:2.4.1.41]
121357067  GALNT14; polypeptide N-acetylgalactosaminyltransferase 14 [KO:K00710] [EC:2.4.1.41]
121357232  GALNT4; polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
121357598  ST6GALNAC4; alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase [KO:K03374] [EC:2.4.3.7]
121358063  GALNT1; polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
121358442  GALNT12; polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
121359539  B4GALT5; beta-1,4-galactosyltransferase 5 isoform X1 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
121359946  ST3GAL1; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
121360362  GALNT7; N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
121360383  [KO:K00710] [EC:2.4.1.41]
121361367  GALNT10; polypeptide N-acetylgalactosaminyltransferase 10 [KO:K00710] [EC:2.4.1.41]
121362132  ST6GALNAC3; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [KO:K03373] [EC:2.4.3.7]
121362963  GALNT17; polypeptide N-acetylgalactosaminyltransferase 17 [KO:K00710] [EC:2.4.1.41]
121363251  C1GALT1C1; C1GALT1-specific chaperone 1 [KO:K09653]
121363326  GALNT18; polypeptide N-acetylgalactosaminyltransferase 18 isoform X1 [KO:K00710] [EC:2.4.1.41]
121363342  GCNT1; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [KO:K00727] [EC:2.4.1.102]
121363660  GCNT4; beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 [KO:K09663] [EC:2.4.1.-]
121363843  ST6GALNAC2; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 isoform X1 [KO:K06616] [EC:2.4.3.3]
121363863  ST6GALNAC1; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 [KO:K03479] [EC:2.4.3.3]
121364971  GALNT9; polypeptide N-acetylgalactosaminyltransferase 9 [KO:K00710] [EC:2.4.1.41]
121365528  GALNT11; polypeptide N-acetylgalactosaminyltransferase 11 [KO:K00710] [EC:2.4.1.41]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  T antigen
G00025  
G00026  
G00027  
G00028  
G00029  
G00030  
G00031  
G00032  
G00033  
G00034  
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794  
G13153  
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
pruf00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   

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