KEGG   PATHWAY: pvt03050
Entry
pvt03050                    Pathway                                
Name
Proteasome - Pogona vitticeps (central bearded dragon)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
pvt03050  Proteasome
pvt03050

Other DBs
GO: 0000502
Organism
Pogona vitticeps (central bearded dragon) [GN:pvt]
Gene
110085572  PSMD3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
110083880  PSMD9; 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [KO:K06693]
110073262  PSMD12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
110081370  PSMD11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
110085209  PSMD6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
110076277  PSMD7; 26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
110086189  PSMD13; 26S proteasome non-ATPase regulatory subunit 13 isoform X1 [KO:K03039]
110081568  PSMD14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
110075615  PSMD8; 26S proteasome non-ATPase regulatory subunit 8 isoform X1 [KO:K03031]
110074731  SEM1; 26S proteasome complex subunit SEM1 isoform X1 [KO:K10881]
110081513  PSMD4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
110070540  PSMD2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
110088747  PSMD1; LOW QUALITY PROTEIN: 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
110086890  ADRM1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
110077187  PSMC2; 26S protease regulatory subunit 7 [KO:K03061]
110086591  PSMC1; 26S protease regulatory subunit 4 [KO:K03062]
110074878  PSMC5; 26S protease regulatory subunit 8 isoform X1 [KO:K03066]
110088780  PSMC6; 26S protease regulatory subunit 10B [KO:K03064]
110082179  PSMC3; 26S protease regulatory subunit 6A [KO:K03065]
110089083  PSMC4; 26S protease regulatory subunit 6B [KO:K03063]
110087537  PSME1; proteasome activator complex subunit 1 isoform X1 [KO:K06696]
110087533  PSME2; proteasome activator complex subunit 2 [KO:K06697]
110080257  PSME3; proteasome activator complex subunit 3 isoform X1 [KO:K06698]
110087936  PSME4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
110083513  PSMA6; proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
110081589  PSMA2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
110086851  PSMA4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
110086880  PSMA7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
110085288  PSMA5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
110083185  PSMA1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
110083778  PSMA3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
110082293  PSMB6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
110078826  PSMB7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
110090743  PSMB3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
110089688  PSMB2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
110087823  PSMB5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
110083080  PSMB1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
110081469  PSMB4; proteasome subunit beta type-4 isoform X1 [KO:K02736] [EC:3.4.25.1]
110071263  proteasome subunit beta type-9-like [KO:K02741] [EC:3.4.25.1]
110071035  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
110087831  PSMB11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
110075093  interferon gamma-like [KO:K04687]
110070799  PSMF1; proteasome inhibitor PI31 subunit [KO:K06700]
110076455  POMP; proteasome maturation protein isoform X1 [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
pvt04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
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