Sphingobium amiense: SAMIE_1011790
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Entry
SAMIE_1011790 CDS
T06684
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sami
Sphingobium amiense
Pathway
sami01501
beta-Lactam resistance
sami02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sami00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMIE_1011790
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SAMIE_1011790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sami02000
]
SAMIE_1011790
01504 Antimicrobial resistance genes [BR:
sami01504
]
SAMIE_1011790
Transporters [BR:
sami02000
]
Other transporters
Pores ion channels [TC:
1
]
SAMIE_1011790
Antimicrobial resistance genes [BR:
sami01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SAMIE_1011790
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SAMIE_1011790
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SAMIE_1011790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
BBD97678
UniProt:
A0A494W3C1
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All DBs
Position
1381186..1382598
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AA seq
470 aa
AA seq
DB search
MAAMIVPSFLSGCSFAPPNVRPAQPVPQDYPAPAALGASIARIGWHDFFREEHLRALIAA
ALENNRDIRIAAARVDQARAAWRIEGSALYPELNAVGTGTRGRSIISLPGAGTQSYDIKQ
VTAQVSASWEIDFWGRLRNLNDAARNRYLATEEAKRAVATGLIAQVANGYLLEREYEERL
ALARRTIVTREDSLRIMRRRYEVGSGSKLEMTQAQLLLAQAQDALQALEQDRDVNRNALA
LLVGRPVEIVPGPLGLAETGPDIALPPGLPSDLLVNRPDIVAAEYQLRAANADIGAARAA
FFPNISLTGAFGTASSDLDGLFGDGSRAWSFTPTIALPLFNAGRLSGNLDLAKARQVEAV
ASYEKTVQGAFRDVSDALVRRRQLALRIDTARSSLDALRERARLAGLRFDNGRSAYLEVL
DAQRDLFDTEQALIQLRRAHLASGIALYAALGGGPAEVVHDSNDQGGEHR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatgatcgtgccatctttcctgtccggctgttccttcgcgccgcccaatgtc
cggccggcccagccggtgccgcaggactatcccgcgccagccgcgctgggcgcgtccatc
gcgcggatcggttggcatgatttcttccgggaagagcatctgcgtgcgctgatcgcggcc
gcgctggagaacaaccgcgatatccgtatcgccgcggcccgcgtcgatcaggcgcgcgcg
gcctggcgtatcgagggatcggcgctctatcccgaactcaacgccgtcggcaccggcacg
cggggtcgttccatcatcagcctgccgggcgcaggcacgcagagctatgacatcaagcag
gtcaccgcgcaggtgagcgcgagctgggaaatcgatttctggggccgtctgcgcaacctg
aacgacgccgcgcgcaatcgttatctggcgacggaagaggcgaagcgcgccgttgccacc
ggcctgatcgcgcaggtcgccaatggctatctgctggagcgcgaatatgaggaacgcctc
gcgcttgcccggcggacgatcgtcacgcgcgaggactcgctgcggatcatgcgtcgccgc
tatgaagttggttcaggttccaaactggaaatgacccaggcgcagttgctgctggcgcag
gcgcaggatgcgctgcaagcgcttgagcaggaccgcgacgtgaaccgcaacgcgctggcg
ctgctggtcgggcggcccgtggagatcgtgcctgggcccctcggtcttgccgaaaccgga
ccggatatcgcccttccgccgggcttgccctccgaccttctggtcaaccggcctgatatc
gtggcggcggaatatcaattgcgggcggccaacgccgatatcggcgcggcgcgggcggcg
ttctttcccaatatcagcctgacgggtgccttcggcacggcgagttccgatctcgacggg
ctgttcggcgacgggagccgcgcgtggagcttcaccccgacgatcgccctgccgctgttc
aatgcgggccgcctttccggcaacctcgatctggcgaaagcgcggcaggtcgaagccgtg
gccagctatgaaaagaccgtgcagggcgcgtttcgtgatgtttccgacgcgctggtccgg
cgccggcaactggcgttgcggatcgacaccgcgcgcagctcgctggacgccttgcgcgaa
cgggctcggctggccgggttgcggttcgacaacgggcgttcggcctatctggaagtgctg
gacgcgcaacgcgaccttttcgacaccgaacaggcgctgatccagttgcgccgcgctcat
ctggcgagcggcatagccctctacgcggcgcttggcgggggtcccgccgaagtcgtccac
gacagcaacgatcaaggcggagaacacaggtga
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integrated database retrieval system