KEGG   PATHWAY: sfd04146
Entry
sfd04146                    Pathway                                
Name
Peroxisome - Sinorhizobium fredii USDA 257
Description
Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.
Class
Cellular Processes; Transport and catabolism
Pathway map
sfd04146  Peroxisome
sfd04146

Other DBs
GO: 0005777
Organism
Sinorhizobium fredii USDA 257 [GN:sfd]
Gene
USDA257_c01130  fadD; long-chain-fatty-acid--CoA ligase FadD [KO:K01897] [EC:6.2.1.3]
USDA257_c07030  sodB; superoxide dismutase [KO:K04564] [EC:1.15.1.1]
USDA257_c08220  sodC; superoxide dismutase [KO:K04565] [EC:1.15.1.1]
USDA257_c20700  pucG; purine catabolism protein PucG [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
USDA257_c22040  sgaA2; serine--glyoxylate aminotransferase SgaA [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
USDA257_c22880  mCD; putative MCD, malonyl-CoA decarboxylase MCD [KO:K01578] [EC:4.1.1.9]
USDA257_c30350  katE; catalase C [KO:K03781] [EC:1.11.1.6]
USDA257_c31650  mvaB; hydroxymethylglutaryl-CoA lyase MvaB [KO:K01640] [EC:4.1.3.4]
USDA257_c40680  icd; isocitrate dehydrogenase [NADP] [KO:K00031] [EC:1.1.1.42]
USDA257_c60540  nudC; NADH pyrophosphatase NudC [KO:K03426] [EC:3.6.1.22]
Reference
  Authors
Wanders RJ, Waterham HR
  Title
Peroxisomal disorders: the single peroxisomal enzyme deficiencies.
  Journal
Biochim Biophys Acta 1763:1707-20 (2006)
DOI:10.1016/j.bbamcr.2006.08.010
Reference
  Authors
Steinberg SJ, Dodt G, Raymond GV, Braverman NE, Moser AB, Moser HW
  Title
Peroxisome biogenesis disorders.
  Journal
Biochim Biophys Acta 1763:1733-48 (2006)
DOI:10.1016/j.bbamcr.2006.09.010
Reference
  Authors
Rottensteiner H, Theodoulou FL
  Title
The ins and outs of peroxisomes: co-ordination of membrane transport and peroxisomal metabolism.
  Journal
Biochim Biophys Acta 1763:1527-40 (2006)
DOI:10.1016/j.bbamcr.2006.08.012
Reference
  Authors
Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K
  Title
Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes.
  Journal
Biochem Biophys Res Commun 344:948-54 (2006)
DOI:10.1016/j.bbrc.2006.04.008
Related
pathway
sfd00071  Fatty acid degradation
sfd00230  Purine metabolism
sfd00564  Glycerophospholipid metabolism
sfd00900  Terpenoid backbone biosynthesis
KO pathway
ko04146   

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