Scomber japonicus (chub mackerel): 128366442
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Entry
128366442 CDS
T09718
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04622
RIG-I-like receptor signaling pathway
sjo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128366442 (adar)
04623 Cytosolic DNA-sensing pathway
128366442 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128366442 (adar)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
128366442 (adar)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128366442 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Motif
Other DBs
NCBI-GeneID:
128366442
NCBI-ProteinID:
XP_053183128
LinkDB
All DBs
Position
10:complement(10255394..10268868)
Genome browser
AA seq
1382 aa
AA seq
DB search
MSRGRGGPSREHYHRHPPPHFQVKENYYRSGPGPFLPRAGPQLSQYPNYYDSLTHPVVPI
QLPTPSFPSAPPAPSHSKVAPNPSHNQNHSPSPAPNSFQYQQVQFLRGQSSEAPQFRASP
RGGGGGVVPGRPPGFSYQPQSGYSRYSNPNSSPKGRGAYSQDQSFARPPGVGPPQGTPGP
RHLNQNQLQSKNYSHYSSRQWGVQTDSVCDSFQNLSLRDRPNRGGDRFDRHSASSRSGNF
NFSKVNITLTPDIQGQVHRALSTLRPSESISAKLLAKKLHLPKKIVNKALYALERSQEAS
KHGLQPPEWTLYREPLRGEENQNSAVQSPASHLCVSSEQPQNPEAKVELKTETAENRGQV
KEEDDSDTDSSGSYCSSSESSDSEGSQSPAKGQHQEEQHPSTTSSPDQELKLPTMTDQKE
QILRYLLDSGEANALIIAKNVGLRSAKQVNPTLYALEKQGEVIKNSEVNPPTWELSNHRR
EMMERSLKASQSTSAVGSQTGVATRDEKGGGSVFLPSPPLPPLPGLEPLPFKESWMPEQS
HSEKSHSTVKPPSFTSKQEEETSEGQWATDDIPEFLNAIRRETDAERLVAAEHNNAIGTV
AVSLAAPPSQNLWAKLQEVRLKNPVSGLMEYAQYLGQNCEFLLLDQSGPSHDPRFRMQVM
LNGRLFPVAEASSKKVAKKDAAAATLRILIGEMQGGASTGDEGNTACMDQVMDIITESSG
AAEGMGEIFGTSSVEGMGMAEGPRQPLSRSLPGGKNPVSVLMEYSQRSGNPIEFIITGQA
GPPHDPRFMYRVKVGESLFAEASAPSKKAARQLAAEEAVKELMADGKLQLNKPQLPLGSS
SDSDAAGSGTTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARGFAAEIR
LVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERAARTGEL
IPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATIIMRRGEGLGTVVSLGT
GNRCVKGEELSLKGDTVNDCHAEIISRRGFVRFLYSELLKHYDGAEDSIFEPAEKNKLRI
KADITFHLYISTAPCGDGALFDKSCSETGDEVEGHQPLFENAKQGKLRTKVENGEGTIPV
ESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITLGYLYSH
GHLTRAVCCRLARDGEAFSQSLPAPFMLNHPEVGRVSVYDSTRHTGKTKESSVNWSFPDQ
HSVEVLDGTKGKLDGNKLAVSRVSKSNLFGLFHSLCQRCGRTDLLSLPSYAQAKMSAMSF
QLAKQQFFRALSVHGYGAWIGKPLEEKSFEEGEGTGSNGASFPVGYGSSRNGGTVEYKQD
EA
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccttccagagaacactaccacagacatccaccaccccat
ttccaggtcaaggagaattactacagatctggcccaggcccattcttaccaagagctggc
ccacagctgagccaatatccaaattactatgacagcctcacccatcctgtagtgcccata
cagctcccaaccccttcattcccctctgctccacctgcaccaagccacagtaaagtggcc
cctaacccctcacacaatcagaatcacagtcccagtcctgctcctaattcctttcagtac
caacaggtgcagttcctcagaggacagagctctgaggctccacagttcagagccagtccg
cgagggggtggagggggagttgtacctggcaggccgcctggtttctcataccagccccag
tcagggtacagtaggtattcaaaccccaacagcagccctaagggtagaggggcttatagc
caggaccagagttttgcacgcccacctggtgtaggacccccgcaaggcaccccaggccct
cgacatctgaatcaaaaccagttacaaagtaaaaactacagccattattccagccgacaa
tggggtgtccaaactgactctgtgtgtgacagttttcagaacttgtcccttcgagacagg
cccaacagaggaggagacaggtttgacagacattctgcatccagcagatcagggaatttt
aactttagtaaagtgaacatcacactcactcctgacatccagggccaggtacacagggct
ctttctactttgagaccaagtgagagcatttctgcaaaattgttggctaaaaagctgcat
ctgcccaaaaagatagtcaacaaggctctctacgctttagaacgctcacaggaagcctcc
aagcacggactccaacctcctgagtggactctgtacagagaacctctcagaggtgaggaa
aatcaaaactctgcagtacaaagtccagcttcccatctgtgtgtcagttcagaacaacct
caaaaccctgaagccaaggttgagctaaaaacagaaacagcagaaaacaggggacaagtt
aaagaagaagacgactctgacacagattccagtggttcttactgctcctcttcagagtca
tctgactctgaaggatcccagtcaccagcaaaaggtcagcaccaggaggaacagcatccc
agcacgaccagttcccctgaccaggaacttaagcttcctacaatgacagaccaaaaggaa
caaattctacggtacctcctggattcaggagaggcaaatgctcttatcatagccaaaaat
gtgggtcttaggagtgccaaacaggtcaaccccaccctctatgccctggagaagcaaggt
gaagtcattaaaaatagtgaagtcaaccctcccacctgggagctctccaaccaccgaaga
gagatgatggagaggagcctcaaagcctcacagagcacatcagctgtggggagccagaca
ggggtagccactagagatgagaagggaggtgggtccgtgttcctgccgtcaccaccacta
ccaccactaccaggccttgagccactgccatttaaggagagttggatgccagagcaaagt
catagtgaaaagtctcattccaccgtcaaacccccctcctttacttcgaaacaagaagaa
gagaccagtgaaggacagtgggctactgacgatatcccagaattcctaaatgccattcgc
agagagacagatgctgagagacttgtagctgcagagcataacaatgccattggaactgtt
gctgtatcgctggctgccccgccttcccagaacctatgggcaaaattacaggaggtgagg
ctgaagaaccctgtgagtggtctcatggagtatgcccagtatctgggccagaactgtgag
ttcttgctcctcgaccagtcgggaccctctcacgacccaagattccgtatgcaggtgatg
ctcaacgggagactttttcctgttgcagaggcttccagcaagaaggttgcaaagaaggac
gctgctgcagccaccctacgcattcttattggagagatgcagggaggtgcgagcacaggg
gacgagggaaatactgcctgtatggaccaagtgatggatatcatcacagaaagcagtggg
gcagctgaaggcatgggggaaatttttgggacaagtagtgtggaagggatggggatggca
gagggacctcgccagccactgtcccggtctctgcctggtgggaagaatccagtgtctgtc
cttatggagtacagtcagcgcagtgggaaccccatcgaattcatcatcacgggccaagca
ggcccaccacatgacccaaggtttatgtaccgggtgaaggttggagaaagtttgttcgca
gaggcctcagctccaagcaagaaggcagcccgccagctggcagcagaggaagctgtcaaa
gaattaatggctgatgggaaactgcagctcaacaagccccagttgcccctgggctcttcc
agtgatagcgatgctgctggttctgggactacatgcccctctttgcccccactgacagca
gatgagttgcgagcagcccatgaggcaggagttggggaccttatcaaccacctaaacaac
aacgcagtatcgggtctgctggagtatgccagagctcggggctttgctgctgagatccgc
ctggtgggccagtctgggccaccacatgagcctaaattcacctaccaggccaaactgggt
ggacgctggttccctccagtctgtgcgtcgaacaaaaaacaggggaagcaagaagctgca
gatgcagctttacgggttctcattggggaggctgagagggcggcccgtactggggagctt
attccagcagagcttccagtgagtggcagcaccttgcatgaccagatagcaatgttgagt
caccagcgtttcaatgccctgacaactcgtatccagcacagtcttctgggacgcaagatc
ctggccaccatcatcatgaggaggggggagggcctggggactgttgtcagcctgggaact
gggaatcgctgtgttaaaggggaggagctgagccttaaaggggacactgttaatgattgc
catgctgaaatcatctccagaagaggatttgttcggtttctgtacagtgagctcctcaag
cactatgatggtgcagaagacagtatatttgagccagctgaaaaaaacaaactgcggatc
aaagctgacatcacctttcacctttacatcagcacggcaccatgcggtgatggtgctctg
tttgataagtcatgcagtgagacaggggatgaagtggagggccaccagcctctgtttgag
aatgctaagcagggaaagctccgcaccaaagtagagaacggcgagggcaccataccagtg
gagtcgagtgcaattgttcccacctgggatggcatccagcacggcgagaggctgcgaacc
atgagctgtagtgataagatccttcgctggaatgtgttgggcctgcagggggcactcctc
actcatttcttgcatcccatctacctgaagtccatcacgcttggctatctgtacagccac
ggtcatctgacacgtgctgtttgctgtcggctggccagagacggtgaagcattctcccaa
agtctccctgccccctttatgctaaaccaccctgaggtgggcagggtgagtgtgtacgac
tccacgcgtcacacgggcaagaccaaggaatccagtgtgaactggagctttccagaccag
cacagtgtagaggtgcttgatgggaccaaaggcaaactggatgggaacaaactggccgtg
tcccgcgtgtccaagtccaacctatttggtctgttccactctctgtgccagcgatgcggc
cgcactgacctcctctccctgccttcctacgctcaggccaagatgtctgccatgtccttc
cagctagccaagcaacaattcttccgagcactcagtgtccacggttacggagcctggatc
ggcaaaccactggaagaaaagagctttgaggaaggggaaggaacaggcagcaatggagca
agtttccccgtgggatacggcagtagtagaaacggaggcactgtggagtacaagcaagat
gaggcttag
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integrated database retrieval system
