KEGG   PATHWAY: tben00531
Entry
tben00531                   Pathway                                
Name
Glycosaminoglycan degradation - Trematomus bernacchii (emerald rockcod)
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
tben00531  Glycosaminoglycan degradation
tben00531

Module
tben_M00076  Dermatan sulfate degradation [PATH:tben00531]
tben_M00077  Chondroitin sulfate degradation [PATH:tben00531]
tben_M00078  Heparan sulfate degradation [PATH:tben00531]
tben_M00079  Keratan sulfate degradation [PATH:tben00531]
Other DBs
GO: 0006027
Organism
Trematomus bernacchii (emerald rockcod) [GN:tben]
Gene
117469429  gusb; beta-glucuronidase [KO:K01195] [EC:3.2.1.31]
117471744  galns; N-acetylgalactosamine-6-sulfatase isoform X1 [KO:K01132] [EC:3.1.6.4]
117473157  idua; alpha-L-iduronidase isoform X1 [KO:K01217] [EC:3.2.1.76]
117473487  naglu; alpha-N-acetylglucosaminidase isoform X1 [KO:K01205] [EC:3.2.1.50]
117474650  sgsh; N-sulphoglucosamine sulphohydrolase [KO:K01565] [EC:3.10.1.1]
117475064  ids; iduronate 2-sulfatase isoform X1 [KO:K01136] [EC:3.1.6.13]
117476439  gnsb; glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [KO:K01137] [EC:3.1.6.14]
117476532  arsb; LOW QUALITY PROTEIN: arylsulfatase B [KO:K01135] [EC:3.1.6.12]
117476588  hexb; beta-hexosaminidase subunit beta isoform X1 [KO:K12373] [EC:3.2.1.52]
117479730  hyal6; hyaluronoglucosaminidase 6 [KO:K01197] [EC:3.2.1.35]
117479738  [KO:K01197] [EC:3.2.1.35]
117479739  [KO:K01197] [EC:3.2.1.35]
117479744  [KO:K01197] [EC:3.2.1.35]
117481695  hgsnat; heparan-alpha-glucosaminide N-acetyltransferase [KO:K10532] [EC:2.3.1.78]
117482283  glb1; beta-galactosidase [KO:K12309] [EC:3.2.1.23]
117483249  [KO:K01197] [EC:3.2.1.35]
117484985  gnsa; N-acetylglucosamine-6-sulfatase [KO:K01137] [EC:3.1.6.14]
117489369  hyal2b; hyaluronidase-2 [KO:K01197] [EC:3.2.1.35]
117489911  hyal1; hyaluronidase-1 [KO:K01197] [EC:3.2.1.35]
117489961  hyal2a; hyaluronidase-2 [KO:K01197] [EC:3.2.1.35]
117491637  hexa; beta-hexosaminidase subunit alpha isoform X1 [KO:K12373] [EC:3.2.1.52]
117494460  hyal3; hyaluronidase-3 isoform X1 [KO:K01197] [EC:3.2.1.35]
117494507  si:dkey-72l14.3; glyco_hydro_56 domain-containing protein [KO:K01197] [EC:3.2.1.35]
117497815  hpse; heparanase isoform X1 [KO:K07964] [EC:3.2.1.166]
117499567  si:dkey-192p21.6; heparan-alpha-glucosaminide N-acetyltransferase [KO:K10532] [EC:2.3.1.78]
117499726  hpse2; inactive heparanase-2 [KO:K07965] [EC:3.2.1.-]
Compound
C00426  Dermatan sulfate
C00573  Keratan sulfate
C00634  Chondroitin 4-sulfate
C00925  Heparan sulfate
G00526  
G00711  
G00872  DWA-2
G01391  
G01945  
G01977  
G02632  
G09660  
G10008  
G10505  Hyaluronic acid
G12336  
G13034  
G13035  
G13036  
G13037  
G13038  
G13039  
G13040  
G13041  
G13042  
G13043  
G13073  
G13074  
Reference
PMID:27570
  Authors
Greiling H, Stuhlsatz HW, Cantz M, Gehler J
  Title
Increased urinary excretion of keratan sulfate in fucosidosis.
  Journal
J Clin Chem Clin Biochem 16:329-34 (1978)
DOI:10.1515/cclm.1978.16.6.329
Reference
PMID:3161730
  Authors
Fuchs W, Beck M, Kresse H
  Title
Intralysosomal formation and metabolic fate of N-acetylglucosamine 6-sulfate from keratan sulfate.
  Journal
Eur J Biochem 151:551-6 (1985)
DOI:10.1111/j.1432-1033.1985.tb09138.x
Related
pathway
tben00532  Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
tben00533  Glycosaminoglycan biosynthesis - keratan sulfate
tben00534  Glycosaminoglycan biosynthesis - heparan sulfate / heparin
KO pathway
ko00531   

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