| T01002 | mmu | Mus musculus (house mouse) |
| T05910 | mcal | Mus caroli (Ryukyu mouse) |
| T05929 | mpah | Mus pahari (shrew mouse) |
| T01003 | rno | Rattus norvegicus (rat) |
| T07224 | mcoc | Mastomys coucha (southern multimammate mouse) |
| T08817 | anu | Arvicanthis niloticus (African grass rat) |
| T10613 | asyl | Apodemus sylvaticus (European woodmouse) |
| T05884 | mun | Meriones unguiculatus (Mongolian gerbil) |
| T02813 | cge | Cricetulus griseus (Chinese hamster) |
| T08306 | maua | Mesocricetus auratus (golden hamster) |
| T08852 | prob | Phodopus roborovskii (desert hamster) |
| T07241 | pleu | Peromyscus leucopus (white-footed mouse) |
| T11302 | pmav | Peromyscus maniculatus bairdii (prairie deer mouse) |
| T08307 | morg | Microtus oregoni (creeping vole) |
| T08493 | mfot | Alexandromys fortis (reed vole) |
| T08327 | aamp | Arvicola amphibius (Eurasian water vole) |
| T11437 | cnl | Chionomys nivalis (European snow vole) |
| T03372 | ngi | Nannospalax galili (Upper Galilee mountains blind mole rat) |
| T02812 | hgl | Heterocephalus glaber (naked mole-rat) |
| T07777 | cpoc | Cavia porcellus (domestic guinea pig) |
| T04791 | ccan | Castor canadensis (American beaver) |
| T07834 | dord | Dipodomys ordii (Ord's kangaroo rat) |
| T07891 | dsp | Dipodomys spectabilis (banner-tailed kangaroo rat) |
| T11079 | dmer | Dipodomys merriami (Merriam's kangaroo rat) |
| T08928 | plop | Perognathus longimembris pacificus (Pacific pocket mouse) |
| T08117 | ncar | Sciurus carolinensis (gray squirrel) |
| T11892 | svul | Sciurus vulgaris (Eurasian red squirrel) |
| T09644 | mmma | Marmota marmota marmota (Alpine marmot) |
| T10664 | iti | Ictidomys tridecemlineatus (thirteen-lined ground squirrel) |
| T11988 | scil | Spermophilus citellus (European ground squirrel) |
| T11987 | mave | Muscardinus avellanarius (hazel dormouse) |