SSDB Best Search Result

Entry:ppi:YSA_03388 (493 a.a.)
Name:transcription elongation factor NusA
KO:K02600 transcription termination/antitermination protein NusA
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Search Result : 179 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ppu:PP_4713 transcription termination/antitermination L K02600     493     3110     1.000      493     
pst:PSPTO_4491 N utilization substance protein A        K02600     493     2884     0.929      493     
psb:Psyr_4181 Transcription termination factor NusA:Tra K02600     493     2883     0.927      493     
avn:Avin_42830 Transcription termination factor NusA    K02600     493     2817     0.895      493     
pae:PA4745 transcription elongation factor NusA         K02600     493     2778     0.882      493     
son:SO_1203 N utilization substance protein A NusA      K02600     499     2058     0.640      495     
yen:YE0433 N utilization substance protein A            K02600     495     2053     0.631      493     
kpn:KPN_03577 transcription elongation factor NusA      K02600     495     2052     0.639      493     
sfl:SF3210 transcription elongation factor NusA         K02600     495     2045     0.639      493     
ecs:ECs_4050 transcription elongation factor NusA       K02600     495     2045     0.639      493     
eco:b3169 transcription termination/antitermination pro K02600     495     2045     0.639      493     
ecj:JW3138 transcription termination/antitermination L  K02600     495     2045     0.639      493     
ece:Z4530 transcription pausing; L factor               K02600     495     2045     0.639      493     
cro:ROD_46631 transcription elongation protein          K02600     495     2043     0.635      493     
yps:YPTB0479 N utilization substance protein A          K02600     495     2028     0.621      493     
ypk:y0687 transcription pausing L factor                K02600     501     2028     0.621      493     
ype:YPO3497 N utilization substance protein A           K02600     495     2028     0.621      493     
ddd:Dda3937_02342 transcription termination/antitermina K02600     496     2026     0.633      493     
vvu:VV1_1695 Transcription termination protein NusA     K02600     495     2011     0.617      493     
vch:VC_0642 N utilization substance protein A           K02600     495     2009     0.619      493     
eam:EAMY_0348 Transcription elongation protein nusA     K02600     501     2003     0.623      499     
enc:ECL_04551 transcription elongation factor NusA      K02600     500     2001     0.618      498     
vpa:VP2457 N utilization substance protein A            K02600     495     1997     0.617      493     
seo:STM14_3970 transcription elongation factor NusA     K02600     500     1993     0.616      498     
stm:STM3287 L factor                                    K02600     500     1993     0.616      498     
mca:MCA1316 N utilization substance protein A           K02600     499     1990     0.603      496     
sty:STY3468 L factor                                    K02600     500     1986     0.614      498     
smar:SM39_4772 transcription termination/antiterminatio K02600     502     1982     0.614      500     
vfi:VF_0485 transcription termination/antitermination L K02600     495     1952     0.611      493     
eca:ECA0711 N utilization substance protein A           K02600     509     1947     0.609      506     
lpn:lpg2773 N utilization substance protein A           K02600     492     1924     0.590      493     
hin:HI_1283 N utilization substance protein A (nusA)    K02600     495     1924     0.603      494     
xom:XOO3052 N utilization substance protein A           K02600     503     1908     0.600      493     
xac:XAC2688 N utilization substance protein A           K02600     503     1908     0.602      493     
xcc:XCC2512 N utilization substance protein A           K02600     503     1904     0.601      494     
apl:APL_0638 transcription elongation protein NusA      K02600     493     1896     0.583      494     
pmu:PM0760 NusA                                         K02600     494     1895     0.581      494     
xfa:XF_0234 N utilization substance protein A           K02600     503     1875     0.590      493     
hdu:HD_1462 transcription termination-antitermination f K02600     493     1819     0.569      494     
bma:BMA1062 N utilization substance protein A           K02600     491     1791     0.566      495     
bps:BPSL1919 N utilization substance protein A          K02600     491     1791     0.566      495     
bxe:Bxe_A2821 NusA antitermination factor               K02600     491     1784     0.558      495     
eba:ebA5840 N utilization substance protein A           K02600     491     1780     0.549      494     
reh:H16_A2307 transcription pausing factor L            K02600     491     1778     0.540      494     
bpe:BP1246 N utilization substance protein A            K02600     492     1772     0.551      494     
buc:BU378 N utilization substance protein A             K02600     496     1770     0.559      494     
rso:RSc1288 probable n utilization substance transcript K02600     491     1763     0.542      493     
acb:A1S_0335 transcription termination/antitermination  K02600     494     1711     0.543      499     
aci:ACIAD0368 transcription termination/antitermination K02600     494     1683     0.537      499     
ngo:NGO_1285 transcription elongation factor NusA       K02600     500     1682     0.520      500     
nme:NMB1642 N utilization substance protein A           K02600     500     1681     0.520      500     
ftu:FTT_0049 N utilization substance protein A          K02600     489     1471     0.445      499     
sme:SMc02912 Probable N utilization substance protein A K02600     542     1426     0.451      479     
ret:RHE_CH00118 N-utilization substance protein A       K02600     533     1424     0.461      479     
mlo:mlr5551 N utilization substance protein A           K02600     531     1422     0.457      479     
atu:Atu0089 N-utilization substance protein A           K02600     538     1418     0.449      479     
bmf:BAB1_2163 Ribosomal protein S1:RNA binding S1:KH do K02600     537     1417     0.462      481     
rru:Rru_A3779 NusA antitermination factor               K02600     516     1417     0.451      494     
bms:BR2163 N utilization substance protein A            K02600     537     1417     0.462      481     
bme:BMEI1967 n utilization substance protein a          K02600     537     1417     0.462      481     
rle:RL0127 putative transcription elongation protein (N K02600     533     1407     0.457      479     
rsp:RSP_1163 NusA antitermination factor                K02600     535     1379     0.474      460     
pde:Pden_2592 NusA antitermination factor               K02600     559     1362     0.474      481     
bja:bll0785 N-utilization substance protein A           K02600     536     1332     0.433      480     
rpa:TX73_002275 transcription termination factor NusA   K02600     537     1317     0.420      512     
ccr:CC_0044 N utilization substance protein A           K02600     548     1303     0.438      482     
rco:RC0817 N utilization substance protein A            K02600     503     1243     0.391      493     
rpr:RP553 N UTILIZATION SUBSTANCE PROTEIN A (nusA)      K02600     503     1212     0.379      493     
gsu:GSU1586 transcription elongation factor NusA        K02600     385     1082     0.442      378     
dvu:DVU_0510 N utilization substance protein A          K02600     428     1020     0.383      412     
wol:WD_1319 N utilization substance protein A           K02600     520      984     0.346      468     
mta:Moth_1047 NusA antitermination factor               K02600     362      980     0.414      345     
bsu:BSU16600 transcription termination/antitermination  K02600     371      967     0.406      374     
cdf:CD630_13070 Transcription elongation protein        K02600     384      954     0.371      375     
lmo:lmo1322 transcription elongation factor NusA        K02600     372      916     0.376      378     
lin:nusA highly similar to N utilization substance prot K02600     372      910     0.376      378     
btk:BT9727_3557 N utilization substance protein A       K02600     368      904     0.389      350     
ban:BA_3953 N utilization substance protein A           K02600     368      904     0.389      350     
bce:BC3814 N utilization substance protein A            K02600     368      894     0.386      350     
sao:SAOUHSC_01243 transcription elongation factor NusA  K02600     391      873     0.369      393     
cbo:CBO2420 putative transcription elongation protein N K02600     457      872     0.320      469     
sau:SA1109 transcription termination-antitermination fa K02600     391      872     0.369      393     
efa:EF1271 N utilization substance protein A            K02600     399      871     0.364      385     
lpl:lp_2043 transcription termination-antitermination f K02600     405      871     0.376      380     
ser:SERP0833 N utilization substance protein A, putativ K02600     407      866     0.367      392     
cac:CA_C1799 Transcription terminator NusA              K02600     353      861     0.369      358     
ljo:LJ_1490 N utilization substance protein A-like prot K02600     406      857     0.380      392     
tth:TT_C0349 N utilization substance protein A          K02600     387      853     0.378      394     
cau:Caur_3011 transcription termination factor NusA     K02600     442      848     0.330      382     
lcb:LCABL_17890 Transcription elongation protein NusA ( K02600     417      843     0.387      351     
tma:TM1777 N utilization substance protein A            K02600     344      829     0.361      341     
llm:llmg_1796 transcription elongation factor nusA      K02600     382      818     0.353      391     
ctb:CTL0352 N utilization substance protein A           K02600     434      809     0.353      417     
lla:L173813 transcription termination protein NusA      K02600     382      809     0.351      390     
ctr:CT_097 transcription termination/antitermination pr K02600     434      795     0.348      417     
cpe:CPE1689 probable transcriptional terminator         K02600     366      795     0.340      374     
fnu:FN2022 N utilization substance protein A            K02600     357      787     0.354      353     
cpn:CPn_0316 N Utilization Protein A                    K02600     434      783     0.338      417     
dra:DR_1797 N-utilization substance protein A           K02600     401      782     0.370      359     
fps:FP0469 Transcription elongation protein NusA        K02600     413      774     0.332      382     
npu:Npun_R5775 NusA antitermination factor              K02600     425      757     0.328      406     
sco:SCO5704 putative transcriptional termination/antite K02600     340      749     0.402      346     
sgu:SGLAU_24555 Transcription elongation protein NusA   K02600     332      744     0.398      342     
ana:alr3829 transcription termination factor            K02600     425      743     0.334      413     
pma:Pro_1647 Transcription elongation factor NusA       K02600     472      741     0.333      421     
sma:SAVERM_2553 putative transcriptional termination/an K02600     328      740     0.410      329     
amd:AMED_6340 transcription elongation factor NusA      K02600     348      738     0.368      340     
syc:syc2073_d N utilization substance protein A         K02600     441      733     0.317      407     
bfr:BF0262 putative nitrogen utilization substance prot K02600     420      732     0.311      395     
sct:SCAT_4486 transcription translation coupling factor K02600     338      730     0.386      347     
ksk:KSE_53050 putative transcription elongation protein K02600     333      728     0.388      338     
syf:Synpcc7942_2022 NusA antitermination factor         K02600     441      728     0.314      407     
bth:BT_3403 putative nitrogen utilization substance pro K02600     439      727     0.301      419     
mtu:Rv2841c transcription termination/antitermination p K02600     347      727     0.360      358     
mtc:MT2907 N utilization substance protein A            K02600     343      727     0.360      358     
syn:slr0743 N utilization substance protein             K02600     458      718     0.310      451     
msm:MSMEG_2625 transcription termination factor NusA    K02600     343      713     0.355      346     
sgr:SGR_1813 putative transcriptional termination/antit K02600     346      708     0.375      352     
rha:RHA1_ro06642 transcription elongation protein NusA  K02600     343      708     0.355      344     
tpa:TP_0892 N utilization substance protein A (nusA)    K02600     485      708     0.309      470     
spn:SP_0553 N utilization substance protein A           K02600     378      706     0.325      369     
mle:ML1558 probable transcription termination/antitermi K02600     347      704     0.345      359     
spy:SPy_1724 transcription termination-antitermination  K02600     385      701     0.328      390     
gvi:glr3489 ORF_ID:glr3489; transcription termination-a K02600     383      699     0.339      369     
spr:spr0478 Transcription termination                   K02600     378      698     0.322      369     
blo:BL1615 N utilization substance homolog              K02600     355      697     0.353      348     
mab:MAB_3135c Transcription elongation protein NusA     K02600     331      696     0.365      345     
smu:SMU_418 putative transcription factor NusA          K02600     397      691     0.312      398     
tel:tll1937 transcription termination-antitermination f K02600     395      686     0.324      361     
aae:aq_259 transcription termination NusA               K02600     337      684     0.358      341     
tde:TDE_1107 N utilization substance protein A, putativ K02600     495      683     0.296      493     
lil:LA_0942 transcription elongation factor NusA        K02600     460      679     0.287      501     
bbu:BB_0800 transcription elongation protein NusA       K02600     482      678     0.303      412     
hth:HTH_0022 transcription elongation factor            K02600     327      662     0.357      350     
cdi:DIP1479 Putative N utilization related protein      K02600     332      653     0.345      348     
cgl:Cgl1987 Transcription terminator                    K02600     332      629     0.384      250     
cte:CT0240 N utilization substance protein A, putative  K02600     521      628     0.304      490     
cje:Cj0460 transcription elongation factor NusA         K02600     362      556     0.271      365     
mpn:MPN_154 N-utilization substance protein A-like prot K02600     540      550     0.297      364     
mge:MG_141 transcription termination factor NusA        K02600     531      512     0.278      356     
hpy:HP_1514 transcription termination factor NusA (nusA K02600     395      491     0.271      373     
hpj:jhp_1407 N-UTILIZATION SUBSTANCE PROTEIN A          K02600     395      489     0.269      372     
cel:CELE_ZK973.6 Nuclear anchorage protein 1                      8545      181     0.227      484     
pfa:PF3D7_1149000 antigen 332, DBL-like protein                   6093      171     0.204      511     
dre:553343 uncharacterized protein si:ch211-266g18.10 i           2692      167     0.224      450     
hal:VNG_2661G transcription termination-antitermination K02600     139      164     0.380      100     
hma:rrnAC2325 replication factor C                      K09384     626      160     0.230      413     
mth:MTH_1054 transcription termination factor NusA      K02600     143      160     0.301      143     
cne:CNI04170 DNA ligase, putative                       K10747     803      149     0.218      404     
afu:AF_1891 transcription termination-antitermination f K02600     139      147     0.298      84      
mdm:139193337 uncharacterized protein                              426      144     0.198      445     
kla:KLLA0_E16391g uncharacterized protein               K03521     259      143     0.252      226     
osa:4337144 MICOS complex subunit MIC60, mitochondrial  K17785     624      142     0.208      423     
vg:40071013 Pseudomonas phage phiPMW; hypothetical prot            383      140     0.213      380     
tko:TK1079 transcription termination-antitermination fa K02600     145      137     0.307      88      
tca:662238 tudor and KH domain-containing protein       K18406     460      133     0.284      102     
cal:CAALFM_C111590WA phospholipase D                    K01115    1710      132     0.203      409     
gmx:100793526 KH domain-containing protein HEN4         K21444     543      130     0.257      335     
sly:101252406 ARM REPEAT PROTEIN INTERACTING WITH ABF2             705      128     0.219      439     
mtr:11424152 protein timeless homolog isoform X1        K10997    1335      127     0.224      398     
ola:101160670 translation factor GUF1, mitochondrial is K21594     675      126     0.227      466     
hvo:HVO_0351 transcription elongation factor NusA       K02600     139      126     0.333      81      
sso:SSO0220 Transcription termination factor nusA homol K02600     124      126     0.268      112     
pfu:PF1560 transcription termination-antitermination fa K02600     145      126     0.295      88      
tps:THAPS_269276 hypothetical RNA binding protein                  535      123     0.247      227     
pai:PAE0669 transcription termination factor NusA, puta K02600     144      123     0.274      106     
bmor:692781 eukaryotic translation initiation factor 4A K03257     420      120     0.215      284     
mba:Mbar_A3689 transcription termination factor NusA    K02600     141      120     0.271      85      
sai:Saci_0689 NusA                                      K02600     130      120     0.316      98      
ape:APE_1850 NusA protein homolog                       K02600     144      119     0.317      82      
cit:102630520 flavonoid 3'-monooxygenase                           533      118     0.218      238     
nmr:Nmar_0082 cobalamin (vitamin B12) biosynthesis CbiG K02189     350      118     0.261      241     
csv:101203911 3-epi-6-deoxocathasterone 23-monooxygenas K12637     470      116     0.213      211     
ag:CAA50649 cytochrome P450 76A1                        K22983     467      114     0.217      235     
zma:109939563 zinc finger BED domain-containing protein            354      114     0.236      216     
xla:108718178 kelch-like protein 6                      K10444     610      114     0.247      239     
ath:AT5G66990 RWP-RK domain-containing protein                     277      114     0.240      200     
mmp:MMP1366 KH domain:KH domain, type 1                 K02600     173      112     0.256      129     
ame:100576947 meiosis-specific with OB domain-containin K22420     476      110     0.206      247     

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