GFIT result for
rfa
|
GFIT result for
rfa
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rfa:A3L23_02704 (315 a.a.) |
-- |
hypothetical protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rhs:A3Q41_00657(315) | 315 | 98.7 | 2165 | 3 | <> | hypothetical protein | |||
| > rhb:NY08_4613(317) | 314 | 93.3 | 2046 | 2 | <> | ATP-dependent DNA ligase | |||
| > rhop:D8W71_25765(?) | 314 | 90.8 | 1989 | 0 | -- | - | |||
| > kfl:Kfla_5287(335) | 313 | 82.7 | 1834 | 4 | -- | DNA polymerase LigD, polymerase domain protein | |||
| > rhu:A3Q40_00154(316) | 314 | 82.2 | 1824 | 2 | -- | hypothetical protein | |||
| > ksl:OG809_01310(?) | 313 | 80.8 | 1809 | 0 | -- | - | |||
| > kqi:F1D05_09390(326) | 311 | 80.7 | 1806 | 3 | -- | DNA polymerase domain-containing protein | |||
| > amd:AMED_4612(314) | 315 | 81.0 | 1790 | 8 | -- | lig; ATP-dependent DNA ligase | |||
| > amm:AMES_4557(314) | 315 | 81.0 | 1790 | 8 | -- | lig; ATP-dependent DNA ligase | |||
| > amn:RAM_23480(314) | 315 | 81.0 | 1790 | 8 | -- | ATP-dependent DNA ligase | |||
| > amz:B737_4557(314) | 315 | 81.0 | 1790 | 8 | -- | lig; ATP-dependent DNA ligase | |||
| > nwl:NWFMUON74_54280(321) | 314 | 79.6 | 1777 | 3 | -- | lig_3; ATP-dependent DNA ligase | |||
| > rko:JWS14_28680(323) | 311 | 80.4 | 1774 | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > rop:ROP_52850(323) | 311 | 80.4 | 1773 | 4 | -- | hypothetical protein | |||
| > rtm:G4H71_12980(323) | 312 | 79.8 | 1773 | 2 | -- | ATP-dependent DNA ligase | |||
| > rpsk:JWS13_15915(323) | 311 | 80.1 | 1770 | 2 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > rha:RHA1_ro05237(323) | 311 | 79.7 | 1767 | 4 | -- | possible DNA ligase (ATP), C-terminal | |||
| > dhi:LH044_10215(?) | 314 | 78.3 | 1766 | 0 | -- | - | |||
| > arhd:VSH64_12330(?) | 311 | 81.4 | 1765 | 0 | -- | - | |||
| > rhw:BFN03_00945(323) | 307 | 80.5 | 1765 | 3 | -- | ATP-dependent DNA ligase | |||
| > sesp:BN6_43600(362) | 312 | 79.5 | 1765 | 6 | -- | hypothetical protein | |||
| > noz:DMB37_29965(324) | 305 | 81.6 | 1764 | 4 | -- | ATP-dependent DNA ligase | |||
| > actu:Actkin_04472(310) | 301 | 81.7 | 1762 | 6 | -- | ykoU_3; putative ATP-dependent DNA ligase YkoU | |||
| > roz:CBI38_25205(323) | 311 | 79.7 | 1759 | 3 | -- | ATP-dependent DNA ligase | |||
| > nbr:O3I_009195(324) | 305 | 81.0 | 1758 | 6 | -- | putative DNA ligase (ATP), C-terminal | |||
| > nfa:NFA_13650(320) | 304 | 80.3 | 1758 | 3 | -- | hypothetical protein | |||
| > nfr:ERS450000_02742(324) | 304 | 80.3 | 1758 | 4 | -- | Putative DNA ligase-like protein Rv0938/MT0965 | |||
| > roa:Pd630_LPD01759(323) | 311 | 79.4 | 1758 | 3 | -- | putative ATP-dependent DNA ligase ykoU | |||
| > aprt:MUY14_13940(316) | 313 | 80.2 | 1757 | 8 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > ccaz:COUCH_09660(319) | 312 | 79.8 | 1752 | 6 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > teh:GKE56_14990(324) | 313 | 78.6 | 1750 | 2 | -- | ATP-dependent DNA ligase | |||
| > ncy:NOCYR_1435(316) | 302 | 80.5 | 1747 | 3 | -- | Putative DNA ligase (ATP), C-terminal | |||
| > nie:KV110_09725(324) | 305 | 80.7 | 1745 | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > ume:RM788_38375(?) | 311 | 78.5 | 1736 | 0 | -- | - | |||
| > ntp:CRH09_10200(328) | 315 | 76.8 | 1734 | 3 | -- | ATP-dependent DNA ligase | |||
| > acts:ACWT_6889(319) | 315 | 78.7 | 1732 | 3 | -- | ATP-dependent DNA ligase | |||
| > ase:ACPL_7020(319) | 315 | 78.7 | 1732 | 3 | -- | DNA ligase (ATP) | |||
| > nno:NONO_c59090(337) | 305 | 79.3 | 1732 | 3 | -- | ligD; putative DNA polymerase LigD | |||
| > aih:Aiant_28300(316) | 315 | 77.8 | 1731 | 4 | -- | lig_1; ATP-dependent DNA ligase | |||
| > actr:Asp14428_65010(319) | 313 | 77.6 | 1729 | 4 | -- | lig_2; ATP-dependent DNA ligase | |||
| > nspu:IFM12276_48450(322) | 302 | 79.5 | 1728 | 0 | -- | lig_4; ATP-dependent DNA ligase | |||
| > ngp:LTT66_04370(325) | 305 | 79.0 | 1727 | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > spin:KV203_00620(318) | 315 | 78.4 | 1723 | 2 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > afs:AFR_34555(319) | 313 | 78.0 | 1720 | 4 | -- | DNA polymerase LigD, polymerase domain-containing protein | |||
| > alo:CRK61264(339) | 312 | 77.6 | 1718 | 5 | -- | ATP-dependent DNA ligase | |||
| > kphy:AOZ06_09115(309) | 312 | 79.2 | 1718 | 5 | -- | ATP-dependent DNA ligase | |||
| > asic:Q0Z83_102400(?) | 315 | 76.8 | 1717 | 0 | -- | - | |||
| > ntc:KHQ06_36950(321) | 305 | 77.4 | 1716 | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > pmad:BAY61_14890(335) | 311 | 76.5 | 1715 | 4 | -- | ATP-dependent DNA ligase | |||
| > naka:H7F38_17155(319) | 308 | 77.9 | 1713 | 2 | -- | ATP-dependent DNA ligase | |||
| > aou:ACTOB_007302(?) | 314 | 77.1 | 1712 | 0 | -- | - | |||
| > nml:Namu_0584(329) | 311 | 77.2 | 1710 | 4 | -- | DNA polymerase LigD, polymerase domain protein | |||
| > aeb:C6I20_00475(320) | 312 | 76.9 | 1708 | 2 | -- | ATP-dependent DNA ligase | |||
| > ocp:NF557_10465(322) | 316 | 76.3 | 1708 | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > nya:LTV02_37180(318) | 302 | 78.1 | 1705 | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > amyc:CU254_19785(313) | 301 | 79.7 | 1704 | 5 | -- | ATP-dependent DNA ligase | |||
| > actl:L3i22_093350(316) | 315 | 77.5 | 1701 | 3 | -- | lig; ATP-dependent DNA ligase | |||
| > orz:FNH13_12270(321) | 316 | 77.2 | 1701 | 2 | -- | ATP-dependent DNA ligase | |||
| > mik:FOE78_20760(323) | 314 | 74.2 | 1700 | 3 | -- | ATP-dependent DNA ligase | |||
| > nah:F5544_11740(323) | 314 | 75.8 | 1697 | 7 | -- | ATP-dependent DNA ligase | |||
| > nano:G5V58_12435(321) | 312 | 77.9 | 1696 | 5 | -- | ATP-dependent DNA ligase | |||
| > nhu:H0264_15220(318) | 305 | 76.4 | 1695 | 5 | -- | ATP-dependent DNA ligase | |||
| > nod:FOH10_18195(324) | 304 | 76.3 | 1694 | 4 | -- | ATP-dependent DNA ligase | |||
| > nmar:HPC71_12005(322) | 313 | 77.0 | 1691 | 0 | -- | ATP-dependent DNA ligase | |||
| > micg:GJV80_13150(320) | 314 | 74.5 | 1690 | 4 | -- | ATP-dependent DNA ligase | |||
| > bcv:Bcav_0664(334) | 308 | 76.9 | 1688 | 4 | -- | DNA polymerase LigD, polymerase domain protein | |||
| > lmoi:VV02_04160(321) | 313 | 76.4 | 1687 | 2 | -- | ATP-dependent DNA ligase | |||
| > nyu:D7D52_10275(?) | 305 | 76.1 | 1687 | 0 | -- | - | |||
| > aab:A4R43_40660(312) | 303 | 78.2 | 1685 | 4 | -- | ATP-dependent DNA ligase | |||
| > actn:L083_6564(320) | 312 | 76.3 | 1684 | 2 | -- | DNA polymerase LigD, polymerase domain-containing protein | |||
| > gbr:Gbro_3272(328) | 315 | 75.6 | 1680 | 3 | -- | DNA polymerase LigD, polymerase domain protein | |||
| > rcr:NCTC10994_01032(320) | 308 | 76.6 | 1680 | 3 | -- | DNA ligase (ATP), C-terminal | |||
| > rrt:4535765_01871(315) | 306 | 77.8 | 1680 | 4 | -- | DNA ligase (ATP), C-terminal | |||
| > aacd:LWP59_20370(309) | 301 | 78.7 | 1677 | 7 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > aez:C3E78_16230(317) | 310 | 76.8 | 1677 | 1 | -- | ATP-dependent DNA ligase | |||
| > amyy:YIM_36405(309) | 303 | 77.9 | 1673 | 5 | -- | ykoU3; putative ATP-dependent DNA ligase YkoU | |||
| > yim:J5M86_13500(325) | 314 | 75.2 | 1672 | 2 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > aori:SD37_22355(312) | 303 | 77.2 | 1671 | 6 | -- | ATP-dependent DNA ligase | |||
| > ams:AMIS_67600(313) | 315 | 74.3 | 1669 | 3 | -- | hypothetical protein | |||
| > muz:H4N58_05650(317) | 311 | 75.9 | 1662 | 3 | -- | ATP-dependent DNA ligase | |||
| > rgor:NMQ04_08185(315) | 304 | 77.6 | 1662 | 2 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > bei:GCM100_11900(324) | 308 | 76.0 | 1661 | 0 | -- | lig_1; ATP-dependent DNA ligase | |||
| > sgrg:L0C25_07075(?) | 316 | 73.1 | 1661 | 0 | -- | - | |||
| > gyu:FE374_18030(320) | 313 | 73.8 | 1658 | 3 | -- | ATP-dependent DNA ligase | |||
| > npi:G7071_14130(322) | 313 | 74.4 | 1657 | 3 | -- | ATP-dependent DNA ligase | |||
| > serw:FY030_09225(321) | 314 | 73.2 | 1656 | 3 | -- | ATP-dependent DNA ligase | |||
| > gji:H1R19_15875(337) | 308 | 75.6 | 1650 | 2 | -- | ATP-dependent DNA ligase | |||
| > ncq:K6T13_07775(322) | 315 | 74.9 | 1650 | 2 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > aqz:KSP35_10595(320) | 312 | 74.4 | 1649 | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > rhq:IM25_14780(312) | 302 | 76.8 | 1649 | 2 | -- | ATP-dependent DNA ligase | |||
| > aroo:NQK81_44300(312) | 303 | 76.6 | 1648 | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > noy:EXE57_02875(320) | 315 | 74.0 | 1648 | 2 | -- | ATP-dependent DNA ligase | |||
| > rby:CEJ39_11420(312) | 302 | 76.8 | 1648 | 2 | -- | ATP-dependent DNA ligase | |||
| > gta:BCM27_16840(326) | 305 | 76.1 | 1647 | 2 | -- | ATP-dependent DNA ligase | |||
| > nca:Noca_2445(326) | 317 | 74.1 | 1647 | 3 | -- | putative DNA ligase (ATP), C-terminal | |||
| > aja:AJAP_17045(312) | 303 | 76.2 | 1646 | 5 | -- | Hypothetical protein | |||
| > amq:AMETH_2185(309) | 301 | 78.1 | 1645 | 7 | -- | lig; DNA polymerase LigD, polymerase domain-containing protein | |||
| > rpy:Y013_00825(312) | 302 | 77.2 | 1641 | 2 | -- | ATP-dependent DNA ligase | |||
| > whr:OG579_05755(?) | 316 | 73.7 | 1641 | 0 | -- | - | |||
| > asd:AS9A_4216(304) | 300 | 74.0 | 1640 | 2 | -- | DNA polymerase LigD, polymerase domain protein | |||