KEGG   DISEASE: Macrodactyly
Entry
H02647                      Disease                                
Name
Macrodactyly
Description
Macrodactyly is a discrete congenital anomaly consisting of enlargement of all tissues localized to the terminal portions of a limb. Macrodactyly is attributed to a somatic mutation in PIK3CA, a component of the mTOR pathway-related overgrowth disorders.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Structural developmental anomalies primarily affecting one body system
   Structural developmental anomalies of the skeleton
    LB97  Limb overgrowth
     H02647  Macrodactyly
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H02647  Macrodactyly
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
PIK3CA [HSA:5290] [KO:K00922]
Other DBs
ICD-11: LB97
MeSH: C562546
OMIM: 155500
Reference
  Authors
Rios JJ, Paria N, Burns DK, Israel BA, Cornelia R, Wise CA, Ezaki M
  Title
Somatic gain-of-function mutations in PIK3CA in patients with macrodactyly.
  Journal
Hum Mol Genet 22:444-51 (2013)
DOI:10.1093/hmg/dds440
Reference
  Authors
Shen XF, Gasteratos K, Spyropoulou GA, Yin F, Rui YJ
  Title
Congenital difference of the hand and foot: Pediatric macrodactyly.
  Journal
J Plast Reconstr Aesthet Surg 75:4054-4062 (2022)
DOI:10.1016/j.bjps.2022.06.059
LinkDB

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KEGG   DISEASE: Megalencephaly-capillary malformation syndrome
Entry
H02153                      Disease                                
Name
Megalencephaly-capillary malformation syndrome;
MCAP syndrome
Description
Megalencephaly-capillary malformation (MCAP) syndrome is a rare overgrowth syndrome. The main symptoms are progressive megalencephaly, polymicrogyria, capillary malformations, syndactyly, and connective tissue dysplasia. Mutations in PIK3CA have been reported in MCAP patients.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2C  Overgrowth syndromes
    H02153  Megalencephaly-capillary malformation syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H02153  Megalencephaly-capillary malformation syndrome
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
PIK3CA [HSA:5290] [KO:K00922]
Drug
Alpelisib [DR:D11011]
Other DBs
ICD-11: LD2C
MeSH: C536142
OMIM: 602501
Reference
  Authors
Mirzaa GM, Conway RL, Gripp KW, Lerman-Sagie T, Siegel DH, deVries LS, Lev D, Kramer N, Hopkins E, Graham JM Jr, Dobyns WB
  Title
Megalencephaly-capillary malformation (MCAP) and megalencephaly-polydactyly-polymicrogyria-hydrocephalus (MPPH) syndromes: two closely related disorders of brain overgrowth and abnormal brain and body morphogenesis.
  Journal
Am J Med Genet A 158A:269-91 (2012)
DOI:10.1002/ajmg.a.34402
Reference
  Authors
Riviere JB, Mirzaa GM, O'Roak BJ, Beddaoui M, Alcantara D, Conway RL, St-Onge J, Schwartzentruber JA, Gripp KW, Nikkel SM, Worthylake T, Sullivan CT, Ward TR, Butler HE, Kramer NA, Albrecht B, Armour CM, Armstrong L, Caluseriu O, Cytrynbaum C, Drolet BA, Innes AM, Lauzon JL, Lin AE, Mancini GM, Meschino WS, Reggin JD, Saggar AK, Lerman-Sagie T, Uyanik G, Weksberg R, Zirn B, Beaulieu CL, Majewski J, Bulman DE, O'Driscoll M, Shendure J, Graham JM Jr, Boycott KM, Dobyns WB
  Title
De novo germline and postzygotic mutations in AKT3, PIK3R2 and PIK3CA cause a spectrum of related megalencephaly syndromes.
  Journal
Nat Genet 44:934-40 (2012)
DOI:10.1038/ng.2331
LinkDB

» Japanese version

KEGG   DISEASE: Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi
Entry
H01912                      Disease                                
Name
Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi;
CLOVE syndrome
Description
Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi (CLOVE) syndrome is a recently delineated disorder that comprises vascular malformations (typically truncal), dysregulated adipose tissue, scoliosis, enlarged bony structures (typically of the legs) without progressive or distorting bony overgrowth. The key feature of this syndrome is a truncal lipomatous mass of variable size that is noted at birth. The fatty growths often extend from the trunk into the retroperitoneum, mediastinum, thoracic cavity, and epidural space. Deeper fast-flow and slow-flow vascular anomalies become evident early in childhood. Most acral deformities become accentuated with growth, are often symmetrical, are not rapidly progressive, and are commonly misdiagnosed as Proteus syndrome. This syndrome is caused by somatic activating mutations in PIK3CA.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2C  Overgrowth syndromes
    H01912  Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H01912  Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
PIK3CA [HSA:5290] [KO:K00922]
Drug
Alpelisib [DR:D11011]
Other DBs
ICD-11: LD2C
MeSH: C567863
OMIM: 612918
Reference
  Authors
Sapp JC, Turner JT, van de Kamp JM, van Dijk FS, Lowry RB, Biesecker LG
  Title
Newly delineated syndrome of congenital lipomatous overgrowth, vascular malformations, and epidermal nevi (CLOVE syndrome) in seven patients.
  Journal
Am J Med Genet A 143A:2944-58 (2007)
DOI:10.1002/ajmg.a.32023
Reference
  Authors
Uller W, Fishman SJ, Alomari AI
  Title
Overgrowth syndromes with complex vascular anomalies.
  Journal
Semin Pediatr Surg 23:208-15 (2014)
DOI:10.1053/j.sempedsurg.2014.06.013
Reference
  Authors
Gucev ZS, Tasic V, Jancevska A, Konstantinova MK, Pop-Jordanova N, Trajkovski Z, Biesecker LG
  Title
Congenital lipomatous overgrowth, vascular malformations, and epidermal nevi (CLOVE) syndrome: CNS malformations and seizures may be a component of this disorder.
  Journal
Am J Med Genet A 146A:2688-90 (2008)
DOI:10.1002/ajmg.a.32515
Reference
  Authors
Bloom J, Upton J 3rd
  Title
CLOVES syndrome.
  Journal
J Hand Surg Am 38:2508-12 (2013)
DOI:10.1016/j.jhsa.2013.08.120
Reference
  Authors
Kurek KC, Luks VL, Ayturk UM, Alomari AI, Fishman SJ, Spencer SA, Mulliken JB, Bowen ME, Yamamoto GL, Kozakewich HP, Warman ML
  Title
Somatic mosaic activating mutations in PIK3CA cause CLOVES syndrome.
  Journal
Am J Hum Genet 90:1108-15 (2012)
DOI:10.1016/j.ajhg.2012.05.006
Reference
  Authors
Lindhurst MJ, Parker VE, Payne F, Sapp JC, Rudge S, Harris J, Witkowski AM, Zhang Q, Groeneveld MP, Scott CE, Daly A, Huson SM, Tosi LL, Cunningham ML, Darling TN, Geer J, Gucev Z, Sutton VR, Tziotzios C, Dixon AK, Helliwell T, O'Rahilly S, Savage DB, Wakelam MJ, Barroso I, Biesecker LG, Semple RK
  Title
Mosaic overgrowth with fibroadipose hyperplasia is caused by somatic activating mutations in PIK3CA.
  Journal
Nat Genet 44:928-33 (2012)
DOI:10.1038/ng.2332
LinkDB

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KEGG   DISEASE: CLAPO syndrome
Entry
H02297                      Disease                                
Name
CLAPO syndrome
Description
CLAPO syndrome is a rare vascular disorder characterized by capillary malformation of the lower lip, lymphatic malformation predominant on the face and neck, asymmetry, and partial/generalized overgrowth. CLAPO is caused by activating mutations in PIK3CA.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2C  Overgrowth syndromes
    H02297  CLAPO syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H02297  CLAPO syndrome
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
PIK3CA [HSA:5290] [KO:K00922]
Other DBs
ICD-11: LD2C
MeSH: C567763
OMIM: 613089
Reference
  Authors
Lopez-Gutierrez JC, Lapunzina P
  Title
Capillary malformation of the lower lip, lymphatic malformation of the face and neck, asymmetry and partial/generalized overgrowth (CLAPO): report of six cases of a new syndrome/association.
  Journal
Am J Med Genet A 146A:2583-8 (2008)
DOI:10.1002/ajmg.a.32517
Reference
  Authors
Rodriguez-Laguna L, Ibanez K, Gordo G, Garcia-Minaur S, Santos-Simarro F, Agra N, Vallespin E, Fernandez-Montano VE, Martin-Arenas R, Del Pozo A, Gonzalez-Pecellin H, Mena R, Rueda-Arenas I, Gomez MV, Villaverde C, Bustamante A, Ayuso C, Ruiz-Perez VL, Nevado J, Lapunzina P, Lopez-Gutierrez JC, Martinez-Glez V
  Title
CLAPO syndrome: identification of somatic activating PIK3CA mutations and delineation of the natural history and phenotype.
  Journal
Genet Med 20:882-889 (2018)
DOI:10.1038/gim.2017.200
LinkDB

» Japanese version

KEGG   DISEASE: Cerebral cavernous malformation
Entry
H00534                      Disease                                
Name
Cerebral cavernous malformation
Description
Cerebral cavernous malformations (CCM) are vascular malformations of the central nervous system comprising enlarged caverns with a single layer of endothelium, which easily lead to cerebral hemorrhages. The disease present as either sporadic or autosomal dominant conditions and is linked to three genes KRIT1, MGC4607, and PDCD10. Mutations in KRIT1 impair its interaction with ICAP-1 alpha, and influence beta 1 integrin-dependent angiogenesis.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 08 Diseases of the nervous system
  Cerebrovascular diseases
   8B22  Certain specified cerebrovascular diseases
    H00534  Cerebral cavernous malformation
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H00534  Cerebral cavernous malformation
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
(CCM1) KRIT1 [HSA:889] [KO:K17705]
(CCM2) MGC4607 [HSA:83605] [KO:K26416]
(CCM3) PDCD10 [HSA:11235] [KO:K18269]
(CCM4) PIK3CA [HSA:5290] [KO:K00922]
(CCM5) MAP3K3 [HSA:4215] [KO:K04421]
Other DBs
ICD-11: 8B22.41
MeSH: D020786
OMIM: 116860 603284 603285 619538 621032
Reference
  Authors
Brouillard P, Vikkula M
  Title
Genetic causes of vascular malformations.
  Journal
Hum Mol Genet 16 Spec No. 2:R140-9 (2007)
DOI:10.1093/hmg/ddm211
Reference
PMID:16379592 (CCM1,2,3)
  Authors
Wang QK
  Title
Update on the molecular genetics of vascular anomalies.
  Journal
Lymphat Res Biol 3:226-33 (2005)
DOI:10.1089/lrb.2005.3.226
Reference
PMID:34496175 (CCM4)
  Authors
Peyre M, Miyagishima D, Bielle F, Chapon F, Sierant M, Venot Q, Lerond J, Marijon P, Abi-Jaoude S, Le Van T, Labreche K, Houlston R, Faisant M, Clemenceau S, Boch AL, Nouet A, Carpentier A, Boetto J, Louvi A, Kalamarides M
  Title
Somatic PIK3CA Mutations in Sporadic Cerebral Cavernous Malformations.
  Journal
N Engl J Med 385:996-1004 (2021)
DOI:10.1056/NEJMoa2100440
Reference
PMID:33729480 (CCM5)
  Authors
Hong T, Xiao X, Ren J, Cui B, Zong Y, Zou J, Kou Z, Jiang N, Meng G, Zeng G, Shan Y, Wu H, Chen Z, Liang J, Xiao X, Tang J, Wei Y, Ye M, Sun L, Li G, Hu P, Hui R, Zhang H, Wang Y
  Title
Somatic MAP3K3 and PIK3CA mutations in sporadic cerebral and spinal cord cavernous malformations.
  Journal
Brain 144:2648-2658 (2021)
DOI:10.1093/brain/awab117
LinkDB

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KEGG   DISEASE: Cowden syndrome
Entry
H01222                      Disease                                
Name
Cowden syndrome
  Supergrp
PTEN hamartoma tumor syndrome [DS:H00539]
Description
Cowden syndrome (CS) is an autosomal dominant inherited cancer syndrome characterized by benign and malignant breast, thyroid, and endometrial neoplasias in addition to cutaneous findings and macrocephaly. Germ line PTEN mutations have been found in 85% of those with CS. A large heterogeneous group of individuals with Cowden-like syndrome, who have various combinations of Cowden syndrome features but who do not meet Cowden syndrome diagnostic criteria, have PTEN mutations less than 10% of the time. In the absence of germline PTEN mutations, approximately 10% of individuals with Cowden syndrome or Cowden-like syndrome harbor germline succinate dehydrogenase variants SDHB and SDHD.
Category
Congenital malformation
Brite
Human diseases in ICD-11 classification [BR:br08403]
 20 Developmental anomalies
  Multiple developmental anomalies or syndromes
   LD2D  Phakomatoses or hamartoneoplastic syndromes
    H01222  Cowden syndrome
Pathway-based classification of diseases [BR:br08402]
 Signal transduction
  nt06530  PI3K signaling
   H01222  Cowden syndrome
Pathway
hsa04151  PI3K-Akt signaling pathway
Network
nt06530 PI3K signaling
Gene
(CWS1) PTEN [HSA:5728] [KO:K01110]
(CWS2) SDHB [HSA:6390] [KO:K00235]
(CWS3) SDHD [HSA:6392] [KO:K00237]
(CWS4) KLLN [HSA:100144748] [KO:K23389]
(CWS5) PIK3CA [HSA:5290] [KO:K00922]
(CWS6) AKT1 [HSA:207] [KO:K04456]
(CWS7) SEC23B [HSA:10483] [KO:K14006]
Other DBs
ICD-11: LD2D.Y
MeSH: D006223
OMIM: 158350 612359 615106 615107 615108 615109 616858
Reference
PMID:10353779 (PTEN)
  Authors
Celebi JT, Tsou HC, Chen FF, Zhang H, Ping XL, Lebwohl MG, Kezis J, Peacocke M
  Title
Phenotypic findings of Cowden syndrome and Bannayan-Zonana syndrome in a family associated with a single germline mutation in PTEN.
  Journal
J Med Genet 36:360-4 (1999)
DOI:10.1136/jmg.36.5.360
Reference
PMID:18678321 (SDHB, SDHD)
  Authors
Ni Y, Zbuk KM, Sadler T, Patocs A, Lobo G, Edelman E, Platzer P, Orloff MS, Waite KA, Eng C
  Title
Germline mutations and variants in the succinate dehydrogenase genes in Cowden and Cowden-like syndromes.
  Journal
Am J Hum Genet 83:261-8 (2008)
DOI:10.1016/j.ajhg.2008.07.011
Reference
PMID:21177507 (KLLN)
  Authors
Bennett KL, Mester J, Eng C
  Title
Germline epigenetic regulation of KILLIN in Cowden and Cowden-like syndrome.
  Journal
JAMA 304:2724-31 (2010)
DOI:10.1001/jama.2010.1877
Reference
PMID:23246288 (PIK3CA, AKT1)
  Authors
Orloff MS, He X, Peterson C, Chen F, Chen JL, Mester JL, Eng C
  Title
Germline PIK3CA and AKT1 mutations in Cowden and Cowden-like syndromes.
  Journal
Am J Hum Genet 92:76-80 (2013)
DOI:10.1016/j.ajhg.2012.10.021
Reference
PMID:26522472 (SEC23B)
  Authors
Yehia L, Niazi F, Ni Y, Ngeow J, Sankunny M, Liu Z, Wei W, Mester JL, Keri RA, Zhang B, Eng C
  Title
Germline Heterozygous Variants in SEC23B Are Associated with Cowden Syndrome and Enriched in Apparently Sporadic Thyroid Cancer.
  Journal
Am J Hum Genet 97:661-76 (2015)
DOI:10.1016/j.ajhg.2015.10.001
LinkDB

» Japanese version

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