KEGG   PATHWAY: abf00630
Entry
abf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum brasilense Sp7
Class
Metabolism; Carbohydrate metabolism
Pathway map
abf00630  Glyoxylate and dicarboxylate metabolism
abf00630

Module
abf_M00012  Glyoxylate cycle [PATH:abf00630]
abf_M00621  Glycine cleavage system [PATH:abf00630]
abf_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:abf00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum brasilense Sp7 [GN:abf]
Gene
AMK58_13240  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AMK58_02065  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AMK58_20165  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AMK58_23185  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AMK58_12480  malate synthase [KO:K01638] [EC:2.3.3.9]
AMK58_04510  malate synthase G [KO:K01638] [EC:2.3.3.9]
AMK58_02575  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AMK58_06350  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AMK58_23665  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
AMK58_12720  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AMK58_19825  aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AMK58_26795  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AMK58_23235  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AMK58_22500  hypothetical protein [KO:K00626] [EC:2.3.1.9]
AMK58_24020  3-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
AMK58_26800  acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
AMK58_10940  dehydratase [KO:K17865] [EC:4.2.1.55]
AMK58_15735  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
AMK58_06195  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AMK58_26085  acyl-CoA dehydrogenase [KO:K14448] [EC:1.3.8.12]
AMK58_18970  acetyl/propionyl-CoA carboxylase subuit alpha [KO:K01965] [EC:6.4.1.3]
AMK58_18975  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AMK58_18960  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
AMK58_04805  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
AMK58_04810  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
AMK58_04815  2-hydroxy-acid oxidase [KO:K11473] [EC:1.1.99.14]
AMK58_13145  catalase [KO:K03781] [EC:1.11.1.6]
AMK58_27495  catalase [KO:K03781] [EC:1.11.1.6]
AMK58_00835  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
AMK58_11955  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
AMK58_08655  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AMK58_05860  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
AMK58_17570  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
AMK58_23515  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
AMK58_25660  hypothetical protein [KO:K01091] [EC:3.1.3.18]
AMK58_07845  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AMK58_06040  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AMK58_08320  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AMK58_09400  glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
AMK58_09395  glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
AMK58_09410  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AMK58_11795  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMK58_17640  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMK58_09405  glycine cleavage system protein H [KO:K02437]
AMK58_06965  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AMK58_06960  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AMK58_06955  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AMK58_06950  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
AMK58_26155  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AMK58_17065  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
AMK58_04325  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AMK58_21235  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AMK58_21540  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AMK58_26610  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AMK58_17075  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
AMK58_26605  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
AMK58_04330  formate dehydrogenase [KO:K00124]
AMK58_21230  formate dehydrogenase [KO:K00124]
AMK58_21545  formate dehydrogenase [KO:K00124]
AMK58_17080  formate dehydrogenase [KO:K00124]
AMK58_04340  formate dehydrogenase [KO:K00127]
AMK58_21225  formate dehydrogenase [KO:K00127]
AMK58_21550  formate dehydrogenase [KO:K00127]
AMK58_17085  ATP synthase subunit E [KO:K00127]
AMK58_11635  hypothetical protein [KO:K01432] [EC:3.5.1.9]
AMK58_14220  esterase [KO:K01432] [EC:3.5.1.9]
AMK58_18220  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AMK58_24735  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
AMK58_07115  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
AMK58_06905  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
AMK58_26600  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
abf00010  Glycolysis / Gluconeogenesis
abf00020  Citrate cycle (TCA cycle)
abf00030  Pentose phosphate pathway
abf00053  Ascorbate and aldarate metabolism
abf00071  Fatty acid degradation
abf00230  Purine metabolism
abf00250  Alanine, aspartate and glutamate metabolism
abf00260  Glycine, serine and threonine metabolism
abf00620  Pyruvate metabolism
abf00710  Carbon fixation in photosynthetic organisms
abf00750  Vitamin B6 metabolism
abf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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