KEGG   PATHWAY: aly00062
Entry
aly00062                    Pathway                                
Name
Fatty acid elongation - Arabidopsis lyrata (lyrate rockcress)
Class
Metabolism; Lipid metabolism
Pathway map
aly00062  Fatty acid elongation
aly00062

Module
aly_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:aly00062]
Other DBs
GO: 0030497
Organism
Arabidopsis lyrata (lyrate rockcress) [GN:aly]
Gene
9311816  enoyl-[acyl-carrier-protein] reductase, mitochondrial [KO:K07512] [EC:1.3.1.- 1.3.1.38]
9301218  palmitoyl-protein thioesterase 1 [KO:K01074] [EC:3.1.2.22]
9311581  palmitoyl-protein thioesterase 3 isoform X1 [KO:K01074] [EC:3.1.2.22]
9312618  palmitoyl-protein thioesterase 1 [KO:K01074] [EC:3.1.2.22]
9304133  palmitoyl-protein thioesterase 1 isoform X1 [KO:K01074] [EC:3.1.2.22]
9304135  palmitoyl-protein thioesterase 1 [KO:K01074] [EC:3.1.2.22]
9299425  uncharacterized protein LOC9299425 [KO:K01074] [EC:3.1.2.22]
9304136  LOW QUALITY PROTEIN: palmitoyl-protein thioesterase 1 [KO:K01074] [EC:3.1.2.22]
9301199  palmitoyl-protein thioesterase 1 isoform X2 [KO:K01074] [EC:3.1.2.22]
9301200  palmitoyl-protein thioesterase 1 [KO:K01074] [EC:3.1.2.22]
9329114  3-ketoacyl-CoA synthase 4 [KO:K15397] [EC:2.3.1.199]
9299143  3-ketoacyl-CoA synthase 20 [KO:K15397] [EC:2.3.1.199]
9305233  3-ketoacyl-CoA synthase 16 [KO:K15397] [EC:2.3.1.199]
9325447  3-ketoacyl-CoA synthase 1 [KO:K15397] [EC:2.3.1.199]
9305213  3-ketoacyl-CoA synthase 18 [KO:K15397] [EC:2.3.1.199]
9305214  3-ketoacyl-CoA synthase 17 [KO:K15397] [EC:2.3.1.199]
9319946  3-ketoacyl-CoA synthase 8 [KO:K15397] [EC:2.3.1.199]
9325724  3-ketoacyl-CoA synthase 3 [KO:K15397] [EC:2.3.1.199]
9301477  3-ketoacyl-CoA synthase 20 [KO:K15397] [EC:2.3.1.199]
9329484  3-ketoacyl-CoA synthase 5 [KO:K15397] [EC:2.3.1.199]
9312197  3-ketoacyl-CoA synthase 15 [KO:K15397] [EC:2.3.1.199]
9322281  3-ketoacyl-CoA synthase 9 [KO:K15397] [EC:2.3.1.199]
9320229  3-ketoacyl-CoA synthase 18 [KO:K15397] [EC:2.3.1.199]
9307172  3-ketoacyl-CoA synthase 19 [KO:K15397] [EC:2.3.1.199]
9316328  3-ketoacyl-CoA synthase 13 [KO:K15397] [EC:2.3.1.199]
9325562  3-ketoacyl-CoA synthase 2 [KO:K15397] [EC:2.3.1.199]
9300030  probable 3-ketoacyl-CoA synthase 21 [KO:K15397] [EC:2.3.1.199]
9324733  3-ketoacyl-CoA synthase 6 [KO:K15397] [EC:2.3.1.199]
9316881  3-ketoacyl-CoA synthase 11 [KO:K15397] [EC:2.3.1.199]
9316838  3-ketoacyl-CoA synthase 10 [KO:K15397] [EC:2.3.1.199]
9323417  3-ketoacyl-CoA synthase 7 [KO:K15397] [EC:2.3.1.199]
9315242  3-ketoacyl-CoA synthase 12 [KO:K15397] [EC:2.3.1.199]
9324681  very-long-chain 3-oxoacyl-CoA reductase 1 [KO:K10251] [EC:1.1.1.62 1.1.1.330]
9326771  very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 isoform X1 [KO:K10251] [EC:1.1.1.62 1.1.1.330]
9309529  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2 [KO:K10703] [EC:4.2.1.134]
9302421  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 [KO:K10703] [EC:4.2.1.134]
9312365  very-long-chain enoyl-CoA reductase [KO:K10258] [EC:1.3.1.93]
9328110  uncharacterized protein LOC9328110 [KO:K01068] [EC:3.1.2.2]
9311090  uncharacterized protein LOC9311090 isoform X2 [KO:K01068] [EC:3.1.2.2]
Compound
C00024  Acetyl-CoA
C00040  Acyl-CoA
C00083  Malonyl-CoA
C00136  Butanoyl-CoA
C00154  Palmitoyl-CoA
C00162  Fatty acid
C00249  Hexadecanoic acid
C00264  3-Oxoacyl-CoA
C00605  2,3-Dehydroacyl-CoA
C00638  Long-chain fatty acid
C00640  (3S)-3-Hydroxyacyl-CoA
C00658  trans-2,3-Dehydroacyl-CoA
C01832  Lauroyl-CoA
C01944  Octanoyl-CoA
C02593  Tetradecanoyl-CoA
C02843  Long-chain acyl-CoA
C03221  2-trans-Dodecenoyl-CoA
C05258  (S)-3-Hydroxyhexadecanoyl-CoA
C05259  3-Oxopalmitoyl-CoA
C05260  (S)-3-Hydroxytetradecanoyl-CoA
C05261  3-Oxotetradecanoyl-CoA
C05262  (S)-3-Hydroxydodecanoyl-CoA
C05263  3-Oxododecanoyl-CoA
C05264  (S)-Hydroxydecanoyl-CoA
C05265  3-Oxodecanoyl-CoA
C05266  (S)-3-Hydroxyoctanoyl-CoA
C05267  3-Oxooctanoyl-CoA
C05268  (S)-Hydroxyhexanoyl-CoA
C05269  3-Oxohexanoyl-CoA
C05270  Hexanoyl-CoA
C05271  trans-Hex-2-enoyl-CoA
C05272  trans-Hexadec-2-enoyl-CoA
C05273  trans-Tetradec-2-enoyl-CoA
C05274  Decanoyl-CoA
C05275  trans-Dec-2-enoyl-CoA
C05276  trans-Oct-2-enoyl-CoA
C20876  Very-long-chain acyl-CoA
C20877  Very-long-chain 3-oxoacyl-CoA
C20878  Very-long-chain (3R)-3-hydroxyacyl-CoA
C20879  Very-long-chain trans-2,3-dehydroacyl-CoA
Reference
PMID:4387390
  Authors
Seubert W, Lamberts I, Kramer R, Ohly B
  Title
On the mechanism of malonyl-CoA-independent fatty acid synthesis. I. The mechanism of elongation of long-chain fatty acids by acetyl-CoA.
  Journal
Biochim Biophys Acta 164:498-517 (1968)
DOI:10.1016/0005-2760(68)90180-X
Reference
PMID:7150615
  Authors
El-Fakhri M, Middleton B
  Title
The existence of an inner-membrane-bound, long acyl-chain-specific 3-hydroxyacyl-CoA dehydrogenase in mammalian mitochondria.
  Journal
Biochim Biophys Acta 713:270-9 (1982)
DOI:10.1016/0005-2760(82)90244-2
Reference
PMID:8190743
  Authors
Cassagne C, Lessire R, Bessoule JJ, Moreau P, Creach A, Schneider F, Sturbois B
  Title
Biosynthesis of very long chain fatty acids in higher plants.
  Journal
Prog Lipid Res 33:55-69 (1994)
DOI:10.1016/0163-7827(94)90009-4
Reference
  Authors
Jakobsson A, Westerberg R, Jacobsson A.
  Title
Fatty acid elongases in mammals: their regulation and roles in metabolism.
  Journal
Prog Lipid Res 45:237-49 (2006)
DOI:10.1016/j.plipres.2006.01.004
Reference
  Authors
Blacklock BJ, Jaworski JG
  Title
Substrate specificity of Arabidopsis 3-ketoacyl-CoA synthases.
  Journal
Biochem Biophys Res Commun 346:583-90 (2006)
DOI:10.1016/j.bbrc.2006.05.162
Reference
  Authors
Shepherd T, Wynne Griffiths D
  Title
The effects of stress on plant cuticular waxes.
  Journal
New Phytol 171:469-99 (2006)
DOI:10.1111/j.1469-8137.2006.01826.x
Reference
  Authors
Riezman H
  Title
The long and short of fatty acid synthesis.
  Journal
Cell 130:587-8 (2007)
DOI:10.1016/j.cell.2007.08.008
Reference
  Authors
Raffaele S, Leger A, Roby D
  Title
Very long chain fatty acid and lipid signaling in the response of plants to pathogens.
  Journal
Plant Signal Behav 4:94-9 (2009)
DOI:10.4161/psb.4.2.7580
Related
pathway
aly00071  Fatty acid degradation
aly00073  Cutin, suberine and wax biosynthesis
KO pathway
ko00062   
LinkDB

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