KEGG   PATHWAY: axx00240
Entry
axx00240                    Pathway                                
Name
Pyrimidine metabolism - Achromobacter xylosoxidans NCTC10807
Class
Metabolism; Nucleotide metabolism
Pathway map
axx00240  Pyrimidine metabolism
axx00240

Module
axx_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:axx00240]
axx_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:axx00240]
Other DBs
GO: 0006220 0006213
Organism
Achromobacter xylosoxidans NCTC10807 [GN:axx]
Gene
ERS451415_04842  carB; Carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
ERS451415_04843  carA; Carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
ERS451415_00609  pyrB_1; Aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
ERS451415_01738  pyrB_2; Aspartate carbamoyltransferase catalytic chain [KO:K00609] [EC:2.1.3.2]
ERS451415_00794  pyrC_2; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
ERS451415_00610  pyrC_1; Dihydroorotase [KO:K01465] [EC:3.5.2.3]
ERS451415_01041  pyrD; Dihydroorotate dehydrogenase (quinone) [KO:K00254] [EC:1.3.5.2]
ERS451415_05923  pyrE; Orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
ERS451415_05321  orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
ERS451415_02482  pyrH; Uridylate kinase [KO:K09903] [EC:2.7.4.22]
ERS451415_01976  ndk; Nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
ERS451415_01916  yhdE; Maf-like protein yhdE [KO:K06287] [EC:3.6.1.-]
ERS451415_02475  Protein of uncharacterised function DUF45 [KO:K07043] [EC:3.6.1.-]
ERS451415_01508  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
ERS451415_01610  cmk; Cytidylate kinase [KO:K00945] [EC:2.7.4.25]
ERS451415_05613  Putative 5'(3')-deoxyribonucleotidase [KO:K01081] [EC:3.1.3.5]
ERS451415_00287  Probable 5'-nucleotidase precursor [KO:K11751] [EC:3.1.3.5 3.6.1.45]
ERS451415_02622  surE; 5'-nucleotidase surE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
ERS451415_04980  upp; Uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
ERS451415_03701  cpdB; 2'%2C3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor [KO:K01119] [EC:3.1.4.16 3.1.3.6]
ERS451415_00047  codA; Cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
ERS451415_03078  nrdD; Anaerobic ribonucleoside-triphosphate reductase [KO:K21636] [EC:1.1.98.6]
ERS451415_05429  dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
ERS451415_00648  nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha [KO:K00525] [EC:1.17.4.1]
ERS451415_00647  nrdB; Ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
ERS451415_02515  tmk; Thymidylate kinase [KO:K00943] [EC:2.7.4.9]
ERS451415_05404  thyA; Thymidylate synthase [KO:K00560] [EC:2.1.1.45]
ERS451415_02059  amaB_2; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
ERS451415_02189  amaB_3; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
ERS451415_01540  amaB_1; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
ERS451415_05477  amaB_4; N-carbamoyl-L-amino acid hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
ERS451415_00658  rutB; Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [KO:K09020] [EC:3.5.1.110]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
axx00030  Pentose phosphate pathway
axx00220  Arginine biosynthesis
axx00250  Alanine, aspartate and glutamate metabolism
axx00280  Valine, leucine and isoleucine degradation
axx00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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