KEGG   PATHWAY: bbt00630
Entry
bbt00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bradyrhizobium sp. BTAi1
Class
Metabolism; Carbohydrate metabolism
Pathway map
bbt00630  Glyoxylate and dicarboxylate metabolism
bbt00630

Module
bbt_M00012  Glyoxylate cycle [PATH:bbt00630]
bbt_M00621  Glycine cleavage system [PATH:bbt00630]
bbt_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bbt00630]
Other DBs
GO: 0046487 0043648
Organism
Bradyrhizobium sp. BTAi1 [GN:bbt]
Gene
BBta_0025  [KO:K01091] [EC:3.1.3.18]
BBta_0073  [KO:K00015] [EC:1.1.1.26]
BBta_0333  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BBta_0382  acnA; aconitase [KO:K27802]
BBta_0392  mdh; malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
BBta_0398  lpd; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBta_0451  cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
BBta_0452  cbbS; ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
BBta_0456  cbbZ; Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BBta_0544  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BBta_0659  fmdA; formamidase (formamide amidohydrolase) [KO:K01455] [EC:3.5.1.49]
BBta_0816  [KO:K00626] [EC:2.3.1.9]
BBta_0878  [KO:K01915] [EC:6.3.1.2]
BBta_1662  glcD; glycolate oxidase, subunit GlcD [KO:K00104] [EC:1.1.99.14]
BBta_1663  glcE; glycolate oxidase, subunit GlcE [KO:K11472] [EC:1.1.99.14]
BBta_1664  glcF; Glycolate oxidase subunit, (Fe-S)protein, GlcF [KO:K11473] [EC:1.1.99.14]
BBta_1916  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BBta_2126  eda; 2-keto-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BBta_2449  [KO:K05825] [EC:2.6.1.-]
BBta_2641  cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
BBta_2642  cbbS; ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
BBta_2746  [KO:K00626] [EC:2.3.1.9]
BBta_2879  yeaU; tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BBta_2912  [KO:K00626] [EC:2.3.1.9]
BBta_3021  mutB; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
BBta_3023  mutA; heterodimeric methylmalonyl-CoA mutase small subunit [KO:K01847] [EC:5.4.99.2]
BBta_3087  fdsD; formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
BBta_3089  fdsA; formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
BBta_3090  fdsB; formate dehydrogenase beta subunit [KO:K00124]
BBta_3091  fdsG; formate dehydrogenase gamma subunit [KO:K00127]
BBta_3113  [KO:K07749] [EC:2.8.3.16]
BBta_3114  [KO:K01577] [EC:4.1.1.8]
BBta_3191  [KO:K01915] [EC:6.3.1.2]
BBta_3482  cbbZ; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
BBta_3558  [KO:K00626] [EC:2.3.1.9]
BBta_3575  atoB; acetyl-CoA acetyltransferase with thiolase domain [KO:K00626] [EC:2.3.1.9]
BBta_3582  [KO:K01895] [EC:6.2.1.1]
BBta_4188  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
BBta_4284  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BBta_4311  glnII; L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BBta_4383  [KO:K01091] [EC:3.1.3.18]
BBta_4459  lpD; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BBta_4502  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
BBta_4545  [KO:K05606] [EC:5.1.99.1]
BBta_4581  glnA; L-glutamine synthetase [KO:K01915] [EC:6.3.1.2]
BBta_4649  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BBta_4902  [KO:K01965] [EC:6.4.1.3]
BBta_5006  [KO:K00626] [EC:2.3.1.9]
BBta_5024  [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BBta_5095  [KO:K00626] [EC:2.3.1.9]
BBta_5449  gcvT; glycine cleavage system T-protein (aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
BBta_5450  gcvH; Glycine cleavage system H-protein [KO:K02437]
BBta_5451  gcvP; glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit [KO:K00281] [EC:1.4.4.2]
BBta_5565  ttuC; Tartrate dehydrogenase/decarboxylase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BBta_5709  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BBta_5728  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BBta_5729  [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
BBta_6354  [KO:K00123] [EC:1.17.1.9]
BBta_6396  cbbS; ribulose 1,5-bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
BBta_6397  cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
BBta_6719  [KO:K03781] [EC:1.11.1.6]
BBta_6789  [KO:K01895] [EC:6.2.1.1]
BBta_6900  [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BBta_6991  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
BBta_7083  [KO:K11529] [EC:2.7.1.165]
BBta_7567  [KO:K01647] [EC:2.3.3.1]
BBta_7568  [KO:K01647] [EC:2.3.3.1]
BBta_7613  phbB; 3-oxoacyl-[acyl-carrier-protein] reductase [KO:K00023] [EC:1.1.1.36]
BBta_7614  phbA; acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00049  L-Aspartate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C05840  Iminoaspartate
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C19838  D-erythro-3-Hydroxyaspartate
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bbt00010  Glycolysis / Gluconeogenesis
bbt00020  Citrate cycle (TCA cycle)
bbt00030  Pentose phosphate pathway
bbt00053  Ascorbate and aldarate metabolism
bbt00071  Fatty acid degradation
bbt00230  Purine metabolism
bbt00250  Alanine, aspartate and glutamate metabolism
bbt00260  Glycine, serine and threonine metabolism
bbt00270  Cysteine and methionine metabolism
bbt00620  Pyruvate metabolism
bbt00710  Carbon fixation by Calvin cycle
bbt00750  Vitamin B6 metabolism
bbt00910  Nitrogen metabolism
KO pathway
ko00630   

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