KEGG   PATHWAY: bgoe00630
Entry
bgoe00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Brevundimonas goettingensis
Class
Metabolism; Carbohydrate metabolism
Pathway map
bgoe00630  Glyoxylate and dicarboxylate metabolism
bgoe00630

Module
bgoe_M00012  Glyoxylate cycle [PATH:bgoe00630]
bgoe_M00621  Glycine cleavage system [PATH:bgoe00630]
bgoe_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bgoe00630]
Other DBs
GO: 0046487 0043648
Organism
Brevundimonas goettingensis [GN:bgoe]
Gene
IFJ75_11795  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
IFJ75_05160  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
IFJ75_07920  malate synthase G [KO:K01638] [EC:2.3.3.9]
IFJ75_04240  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
IFJ75_16340  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
IFJ75_06920  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
IFJ75_17060  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
IFJ75_10500  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
IFJ75_11375  bktB; beta-ketothiolase BktB [KO:K00626] [EC:2.3.1.9]
IFJ75_14880  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFJ75_15520  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
IFJ75_18875  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
IFJ75_18295  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
IFJ75_11815  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
IFJ75_13215  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
IFJ75_13230  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
IFJ75_13240  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
IFJ75_13220  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
IFJ75_13225  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
IFJ75_04865  catalase [KO:K03781] [EC:1.11.1.6]
IFJ75_13365  catalase [KO:K03781] [EC:1.11.1.6]
IFJ75_15400  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
IFJ75_02200  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
IFJ75_09970  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
IFJ75_07120  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
IFJ75_08760  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
IFJ75_05545  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
IFJ75_05555  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
IFJ75_05535  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
IFJ75_06760  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IFJ75_14830  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IFJ75_15640  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
IFJ75_05540  gcvH; glycine cleavage system protein GcvH [KO:K02437]
IFJ75_16410  kinase [KO:K15918] [EC:2.7.1.31]
IFJ75_19435  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
IFJ75_19445  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
IFJ75_01540  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
IFJ75_10120  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bgoe00010  Glycolysis / Gluconeogenesis
bgoe00020  Citrate cycle (TCA cycle)
bgoe00030  Pentose phosphate pathway
bgoe00053  Ascorbate and aldarate metabolism
bgoe00071  Fatty acid degradation
bgoe00230  Purine metabolism
bgoe00250  Alanine, aspartate and glutamate metabolism
bgoe00260  Glycine, serine and threonine metabolism
bgoe00620  Pyruvate metabolism
bgoe00710  Carbon fixation by Calvin cycle
bgoe00750  Vitamin B6 metabolism
bgoe00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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