KEGG   PATHWAY: bmf00630
Entry
bmf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Brucella abortus 2308
Class
Metabolism; Carbohydrate metabolism
Pathway map
bmf00630  Glyoxylate and dicarboxylate metabolism
bmf00630

Module
bmf_M00012  Glyoxylate cycle [PATH:bmf00630]
bmf_M00621  Glycine cleavage system [PATH:bmf00630]
bmf_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:bmf00630]
Other DBs
GO: 0046487 0043648
Organism
Brucella abortus 2308 [GN:bmf]
Gene
BAB1_1631  Isocitrate lyase and phosphorylmutase:Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
BAB1_1819  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
BAB1_1663  Malate synthase:ATP/GTP-binding site motif A (P-loop):Malate synthase G [KO:K01638] [EC:2.3.3.9]
BAB1_1927  mdh; Lactate/malate dehydrogenase:L-lactate dehydrogenase:TrkA potassium uptake protein [KO:K00024] [EC:1.1.1.37]
BAB1_1170  gltA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
BAB1_0090  Aconitate hydratase, C-terminal:Aconitate hydratase, N-terminal:Aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
BAB2_0790  phbA-2; Phosphofructokinase:Thiolase [KO:K00626] [EC:2.3.1.9]
BAB1_1783  phbA-1; Thiolase [KO:K00626] [EC:2.3.1.9]
BAB2_0443  Thiolase [KO:K00626] [EC:2.3.1.9]
BAB1_0838  Glyoxalase/Bleomycin resistance protein/dioxygenase domain [KO:K05606] [EC:5.1.99.1]
BAB1_1211  Biotin/lipoyl attachment:Biotin-requiring enzyme, attachment site:Carbamoyl-phosphate synthase L chain, ATP-binding:Carbamoyl... [KO:K01965] [EC:6.4.1.3]
BAB1_1210  Carboxyl transferase family:Acetyl-CoA carboxylase carboxyl transferase, beta subunit [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BAB1_1212  bhbA; Methylmalonyl-CoA mutase, N-terminal:Methylmalonyl-CoA mutase:Coenzyme B12-binding:Methylmalonyl-CoA mutase, C-terminal [KO:K01847] [EC:5.4.99.2]
BAB2_0174  ATPase, E1-E2 type:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [KO:K00104] [EC:1.1.99.14]
BAB2_0175  glcE; FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal [KO:K11472] [EC:1.1.99.14]
BAB2_0176  glcF; 4Fe-4S ferredoxin, iron-sulfur binding domain:Aldehyde dehydrogenase:Protein of unknown function DUF224 [KO:K11473] [EC:1.1.99.14]
BAB2_0848  Catalase [KO:K03781] [EC:1.11.1.6]
BAB1_2178  TrkA potassium uptake protein:D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain:D-isomer specific 2-hydroxyacid... [KO:K00015] [EC:1.1.1.26]
BAB1_0005  Pyridine nucleotide-disulphide oxidoreductase, class I:D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [KO:K12972] [EC:1.1.1.79 1.1.1.81]
BAB1_0318  Eukaryotic thiol (cysteine) protease:ATPase, E1-E2 type:Blood group Rhesus C/E and D polypeptide:Haloacid dehalogenase/epoxid... [KO:K01091] [EC:3.1.3.18]
BAB1_1021  Haloacid dehalogenase-like hydrolase:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily... [KO:K01091] [EC:3.1.3.18]
BAB1_1027  cbbZ; Haloacid dehalogenase/epoxide hydrolase:Haloacid dehalogenase-like hydrolase:2-phosphoglycolate phosphatase, prokaryotic:HAD-... [KO:K01091] [EC:3.1.3.18]
BAB2_0471  Glutamine synthetase, catalytic domain [KO:K01915] [EC:6.3.1.2]
BAB2_0507  Glutamine synthetase, catalytic domain [KO:K01915] [EC:6.3.1.2]
BAB1_1023  glnA; Glutamine synthetase class-I, adenylation site:Glutamine synthetase type I:Glutamine synthetase, catalytic domain:Glutamine s... [KO:K01915] [EC:6.3.1.2]
BAB1_0787  glyA; Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BAB2_0515  gcvP; Glycine cleavage system P-protein [KO:K00281] [EC:1.4.4.2]
BAB2_0513  gcvT; Glycine cleavage T protein (aminomethyl transferase) [KO:K00605] [EC:2.1.2.10]
BAB1_1149  Pyridine nucleotide-disulphide oxidoreductase, class-II:Mercuric reductase:Pyridine nucleotide-disulphide oxidoreductase, cla... [KO:K00382] [EC:1.8.1.4]
BAB1_1918  lpdA-2; Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding site:Adrenodoxin reductase:Mercuric reductase:Pyridine nu... [KO:K00382] [EC:1.8.1.4]
BAB2_0712  lpdA-3; Pyridine nucleotide-disulphide oxidoreductase, class-II:NAD binding site:Pyridine nucleotide-disulphide oxidoreductase, class... [KO:K00382] [EC:1.8.1.4]
BAB2_0514  gcvH; Glycine cleavage H-protein:2-oxo acid dehydrogenase, acyltransferase component, lipoyl-binding [KO:K02437]
BAB1_0384  MOFRL [KO:K11529] [EC:2.7.1.165]
BAB2_0083  KDPG and KHG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BAB2_0326  purU; Formyl transferase, N-terminal:Amino acid-binding ACT:Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
BAB2_0304  N-formylglutamate amidohydrolase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bmf00010  Glycolysis / Gluconeogenesis
bmf00020  Citrate cycle (TCA cycle)
bmf00030  Pentose phosphate pathway
bmf00053  Ascorbate and aldarate metabolism
bmf00071  Fatty acid degradation
bmf00230  Purine metabolism
bmf00250  Alanine, aspartate and glutamate metabolism
bmf00260  Glycine, serine and threonine metabolism
bmf00620  Pyruvate metabolism
bmf00710  Carbon fixation by Calvin cycle
bmf00750  Vitamin B6 metabolism
bmf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system