KEGG   PATHWAY: cmk00512
Entry
cmk00512                    Pathway                                
Name
Mucin type O-glycan biosynthesis - Callorhinchus milii (elephant shark)
Description
O-glycans are a class of glycans that modify serine or threonine residues of proteins. Biosynthesis of O-glycans starts from the transfer of N-acetylgalactosamine (GalNAc) to serine or threonine. The first GalNAc may be extended with sugars including galactose, N-acetylglucosamine, fucose, or sialic acid, but not mannose, glucose, or xylose. Depending on the sugars added, there are four common O-glycan core structures, cores 1 through 4, and an additional four, cores 5 though 8. Mucins are highly O-glycosylated glycoproteins ubiquitous in mucous secretions on cell surfaces and in body fluids. Mucin O-glycans can be branched, and many sugars or groups of sugars are antigenic. Important modifications of mucin O-glycans include O-acetylation of sialic acid and O-sulfation of galactose and N-acetylglucosamine.
Class
Metabolism; Glycan biosynthesis and metabolism
Pathway map
cmk00512  Mucin type O-glycan biosynthesis
cmk00512

Other DBs
GO: 0006493
Organism
Callorhinchus milii (elephant shark) [GN:cmk]
Gene
103176360  galnt3; polypeptide N-acetylgalactosaminyltransferase 3 [KO:K00710] [EC:2.4.1.41]
103176411  galnt13; polypeptide N-acetylgalactosaminyltransferase 13 isoform X1 [KO:K00710] [EC:2.4.1.41]
103176570  LOW QUALITY PROTEIN: polypeptide N-acetylgalactosaminyltransferase 5 [KO:K00710] [EC:2.4.1.41]
103175071  polypeptide N-acetylgalactosaminyltransferase 18 [KO:K00710] [EC:2.4.1.41]
103178463  galnt16; polypeptide N-acetylgalactosaminyltransferase 16 [KO:K00710] [EC:2.4.1.41]
103178486  polypeptide N-acetylgalactosaminyltransferase 11 [KO:K00710] [EC:2.4.1.41]
103180231  galnt7; N-acetylgalactosaminyltransferase 7 isoform X1 [KO:K00710] [EC:2.4.1.41]
103180232  galntl6; polypeptide N-acetylgalactosaminyltransferase-like 6 [KO:K00710] [EC:2.4.1.41]
103181277  polypeptide N-acetylgalactosaminyltransferase 15 [KO:K00710] [EC:2.4.1.41]
103181177  galnt1; polypeptide N-acetylgalactosaminyltransferase 1 [KO:K00710] [EC:2.4.1.41]
103181644  galnt14; polypeptide N-acetylgalactosaminyltransferase 14 isoform X1 [KO:K00710] [EC:2.4.1.41]
103189432  galnt11; polypeptide N-acetylgalactosaminyltransferase 11 isoform X1 [KO:K00710] [EC:2.4.1.41]
103189148  galnt2; polypeptide N-acetylgalactosaminyltransferase 2 [KO:K00710] [EC:2.4.1.41]
103189984  polypeptide N-acetylgalactosaminyltransferase 6 [KO:K00710] [EC:2.4.1.41]
103186345  poc1bl; polypeptide N-acetylgalactosaminyltransferase 4 [KO:K00710] [EC:2.4.1.41]
103186346  galnt12; polypeptide N-acetylgalactosaminyltransferase 12 [KO:K00710] [EC:2.4.1.41]
103186358  polypeptide N-acetylgalactosaminyltransferase 12-like [KO:K00710] [EC:2.4.1.41]
103188453  galnt17; polypeptide N-acetylgalactosaminyltransferase 17 isoform X1 [KO:K00710] [EC:2.4.1.41]
103183979  galnt9; polypeptide N-acetylgalactosaminyltransferase 9 [KO:K00710] [EC:2.4.1.41]
103183707  polypeptide N-acetylgalactosaminyltransferase 10 [KO:K00710] [EC:2.4.1.41]
103183841  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2 [KO:K00731] [EC:2.4.1.122]
103185987  si:dkey-202e17.1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [KO:K00731] [EC:2.4.1.122]
103173764  c1galt1b; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B [KO:K00731] [EC:2.4.1.122]
103178564  c1galt1c1; C1GALT1-specific chaperone 1 [KO:K09653]
103188128  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [KO:K00727] [EC:2.4.1.102]
103186097  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [KO:K00727] [EC:2.4.1.102]
103188734  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3-like [KO:K09662] [EC:2.4.1.-]
103186370  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1 [KO:K09663] [EC:2.4.1.-]
103189009  CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1 [KO:K00780] [EC:2.4.3.2 2.4.3.4]
103186659  st3gal2; CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2 [KO:K03368] [EC:2.4.3.2 2.4.3.4]
103175572  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [KO:K06616] [EC:2.4.3.3]
103175574  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 [KO:K06616] [EC:2.4.3.3]
103174732  st6galnac3; alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [KO:K03373] [EC:2.4.3.7]
103181970  LOW QUALITY PROTEIN: N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 [KO:K07970] [EC:2.4.1.146 2.4.1.149]
103172840  beta-1,4-galactosyltransferase 5 [KO:K09905] [EC:2.4.1.274 2.4.1.-]
Compound
C02189  [Protein]-L-serine
G00023  Tn antigen
G00024  Thomsen-Friedenreich antigen
G00025   
G00026  Sialyl T antigen
G00027   
G00028   
G00029   
G00030   
G00031   
G00032   
G00033   
G00034   
G00035  Sialyl-Tn antigen
G10611  UDP-N-acetyl-D-galactosamine
G10794   
G13153   
Reference
  Authors
Brockhausen I.
  Title
Pathways of O-glycan biosynthesis in cancer cells.
  Journal
Biochim Biophys Acta 1473:67-95 (1999)
DOI:10.1016/S0304-4165(99)00170-1
Reference
  Authors
Iwai T, Inaba N, Naundorf A, Zhang Y, Gotoh M, Iwasaki H, Kudo T, Togayachi A, Ishizuka Y, Nakanishi H, Narimatsu H.
  Title
Molecular cloning and characterization of a novel UDP-GlcNAc:GalNAc-peptide beta1,3-N-acetylglucosaminyltransferase (beta 3Gn-T6), an enzyme synthesizing the core 3 structure of O-glycans.
  Journal
J Biol Chem 277:12802-9 (2002)
DOI:10.1074/jbc.M112457200
Reference
  Authors
Korekane H, Taguchi T, Sakamoto Y, Honke K, Dohmae N, Salminen H, Toivonen S, Helin J, Takio K, Renkonen O, Taniguchi N.
  Title
Purification and cDNA cloning of UDP-GlcNAc:GlcNAcbeta1-3Galbeta1-4Glc(NAc)-R [GlcNAc to Gal]beta1,6N-acetylglucosaminyltransferase from rat small intestine: a major carrier of dIGnT activity in rat small intestine.
  Journal
Glycobiology 13:387-400 (2003)
DOI:10.1093/glycob/cwg044
Reference
  Authors
van Die I, van Tetering A, Schiphorst WE, Sato T, Furukawa K, van den Eijnden DH.
  Title
The acceptor substrate specificity of human beta4-galactosyltransferase V indicates its potential function in O-glycosylation.
  Journal
FEBS Lett 450:52-6 (1999)
DOI:10.1016/S0014-5793(99)00462-7
Reference
  Authors
Marcos NT, Pinho S, Grandela C, Cruz A, Samyn-Petit B, Harduin-Lepers A, Almeida R, Silva F, Morais V, Costa J, Kihlberg J, Clausen H, Reis CA
  Title
Role of the human ST6GalNAc-I and ST6GalNAc-II in the synthesis of the cancer-associated sialyl-Tn antigen.
  Journal
Cancer Res 64:7050-7 (2004)
DOI:10.1158/0008-5472.CAN-04-1921
Reference
  Authors
Lee YC, Kaufmann M, Kitazume-Kawaguchi S, Kono M, Takashima S, Kurosawa N, Liu H, Pircher H, Tsuji S
  Title
Molecular cloning and functional expression of two members of mouse NeuAcalpha2,3Galbeta1,3GalNAc GalNAcalpha2,6-sialyltransferase family, ST6GalNAc  III and IV.
  Journal
J Biol Chem 274:11958-67 (1999)
DOI:10.1074/jbc.274.17.11958
Reference
  Authors
Kudelka MR, Ju T, Heimburg-Molinaro J, Cummings RD
  Title
Simple sugars to complex disease--mucin-type O-glycans in cancer.
  Journal
Adv Cancer Res 126:53-135 (2015)
DOI:10.1016/bs.acr.2014.11.002
Reference
  Authors
Yeh JC, Hiraoka N, Petryniak B, Nakayama J, Ellies LG, Rabuka D, Hindsgaul O, Marth JD, Lowe JB, Fukuda M
  Title
Novel sulfated lymphocyte homing receptors and their control by a Core1 extension beta 1,3-N-acetylglucosaminyltransferase.
  Journal
Cell 105:957-69 (2001)
DOI:10.1016/S0092-8674(01)00394-4
Related
pathway
cmk00533  Glycosaminoglycan biosynthesis - keratan sulfate
KO pathway
ko00512   
LinkDB

DBGET integrated database retrieval system