KEGG   PATHWAY: dti00630
Entry
dti00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Desulfomonile tiedjei
Class
Metabolism; Carbohydrate metabolism
Pathway map
dti00630  Glyoxylate and dicarboxylate metabolism
dti00630

Module
dti_M00621  Glycine cleavage system [PATH:dti00630]
dti_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:dti00630]
Other DBs
GO: 0046487 0043648
Organism
Desulfomonile tiedjei [GN:dti]
Gene
Desti_0219  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desti_2341  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desti_4164  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desti_2345  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Desti_2348  acyl-CoA synthetase/AMP-acid ligase [KO:K01895] [EC:6.2.1.1]
Desti_3839  malate dehydrogenase (NAD) [KO:K00024] [EC:1.1.1.37]
Desti_2613  2-methylcitrate synthase/citrate synthase II [KO:K01647] [EC:2.3.3.1]
Desti_1767  aconitase [KO:K01681] [EC:4.2.1.3]
Desti_2159  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_1764  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_3732  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_5425  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_5426  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_5428  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_0807  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_1477  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_1371  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_1579  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_5039  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_2250  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_1637  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_2452  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Desti_4582  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Desti_5416  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
Desti_3852  4-hydroxyphenylpyruvate dioxygenase/hemolysin-like protein [KO:K05606] [EC:5.1.99.1]
Desti_2972  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Desti_1826  lactoylglutathione lyase-like lyase [KO:K05606] [EC:5.1.99.1]
Desti_3940  acetyl/propionyl-CoA carboxylase, alpha subunit [KO:K01965] [EC:6.4.1.3]
Desti_4049  acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Desti_3941  acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Desti_1832  methylmalonyl-CoA mutase family protein [KO:K01849] [EC:5.4.99.2]
Desti_4050  methylmalonyl-CoA mutase family protein [KO:K01849] [EC:5.4.99.2]
Desti_2975  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
Desti_1833  methylmalonyl-CoA mutase family protein [KO:K01848] [EC:5.4.99.2]
Desti_0036  FAD/FMN-dependent dehydrogenase [KO:K00104] [EC:1.1.99.14]
Desti_2232  FAD/FMN-dependent dehydrogenase [KO:K00104] [EC:1.1.99.14]
Desti_2231  Fe-S oxidoreductase [KO:K11473] [EC:1.1.99.14]
Desti_3223  Fe-S oxidoreductase [KO:K11473] [EC:1.1.99.14]
Desti_5373  lactate dehydrogenase-like oxidoreductase [KO:K00015] [EC:1.1.1.26]
Desti_2333  putative phosphatase [KO:K01091] [EC:3.1.3.18]
Desti_1316  serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Desti_3607  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Desti_1040  glycine/serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Desti_1463  glycine cleavage system protein P [KO:K00282] [EC:1.4.4.2]
Desti_1464  glycine cleavage system protein P [KO:K00283] [EC:1.4.4.2]
Desti_1461  glycine cleavage system T protein (aminomethyltransferase) [KO:K00605] [EC:2.1.2.10]
Desti_0240  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desti_1340  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desti_0755  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Desti_2081  glycine cleavage system H protein (lipoate-binding) [KO:K02437]
Desti_0173  glycine cleavage system H protein [KO:K02437]
Desti_1179  glycine cleavage system H protein [KO:K02437]
Desti_1462  glycine cleavage system H protein [KO:K02437]
Desti_0746  glycine cleavage system H protein (lipoate-binding) [KO:K02437]
Desti_5526  putative glycerate kinase [KO:K11529] [EC:2.7.1.165]
Desti_1805  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Desti_2315  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Desti_1804  Fe-S-cluster-containing hydrogenase subunit [KO:K00124]
Desti_2314  Fe-S-cluster-containing hydrogenase subunit [KO:K00124]
Desti_5329  Fe-S-cluster-containing hydrogenase subunit [KO:K00124]
Desti_2107  putative metal-dependent hydrolase [KO:K07130] [EC:3.5.1.9]
Desti_3828  putative metal-dependent hydrolase [KO:K07130] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
dti00010  Glycolysis / Gluconeogenesis
dti00020  Citrate cycle (TCA cycle)
dti00030  Pentose phosphate pathway
dti00053  Ascorbate and aldarate metabolism
dti00071  Fatty acid degradation
dti00230  Purine metabolism
dti00250  Alanine, aspartate and glutamate metabolism
dti00260  Glycine, serine and threonine metabolism
dti00620  Pyruvate metabolism
dti00710  Carbon fixation by Calvin cycle
dti00750  Vitamin B6 metabolism
dti00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system