KEGG   PATHWAY: ely03022
Entry
ely03022                    Pathway                                
Name
Basal transcription factors - Epinephelus lanceolatus (giant grouper)
Class
Genetic Information Processing; Transcription
Pathway map
ely03022  Basal transcription factors
ely03022

Other DBs
GO: 0005668 0005669 0005672 0005673 0005674 0005675
Organism
Epinephelus lanceolatus (giant grouper) [GN:ely]
Gene
117247017  [KO:K03120]
117251660  gtf2e1; general transcription factor IIE subunit 1 [KO:K03136]
117251665  [KO:K03139] [EC:5.6.2.-]
117251902  gtf2a2; transcription initiation factor IIA subunit 2 [KO:K03123]
117252221  cdk7; cyclin-dependent kinase 7 [KO:K02202] [EC:2.7.11.22 2.7.11.23]
117252407  ccnh; cyclin-H [KO:K06634]
117252856  gtf2h2; general transcription factor IIH subunit 2 [KO:K03142]
117253085  tbp; TATA-box-binding protein [KO:K03120]
117253167  gtf2h3; general transcription factor IIH subunit 3 [KO:K03143]
117255603  gtf2e2; transcription initiation factor IIE subunit beta [KO:K03137]
117255798  taf5l; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [KO:K03130]
117255979  taf5; transcription initiation factor TFIID subunit 5 [KO:K03130]
117257078  taf4a; transcription initiation factor TFIID subunit 4 isoform X1 [KO:K03129]
117257912  [KO:K03129]
117257931  taf8; transcription initiation factor TFIID subunit 8 [KO:K14649]
117258335  taf11; transcription initiation factor TFIID subunit 11 [KO:K03135]
117258742  [KO:K03129]
117258990  taf13; transcription initiation factor TFIID subunit 13 [KO:K03127]
117259435  ercc3; general transcription and DNA repair factor IIH helicase subunit XPB [KO:K10843] [EC:5.6.2.4]
117259771  ercc2; general transcription and DNA repair factor IIH helicase subunit XPD [KO:K10844] [EC:5.6.2.3]
117259946  gtf2f2a; general transcription factor IIF subunit 2 isoform X1 [KO:K03139] [EC:5.6.2.-]
117260849  taf7; transcription initiation factor TFIID subunit 7 [KO:K03132]
117261794  gtf2h1; general transcription factor IIH subunit 1 [KO:K03141]
117262328  [KO:K03129]
117262576  taf3; transcription initiation factor TFIID subunit 3 isoform X1 [KO:K14650]
117263600  taf6; transcription initiation factor TFIID subunit 6 [KO:K03131]
117263846  gtf2h4; general transcription factor IIH subunit 4 isoform X1 [KO:K03144]
117264147  taf10; transcription initiation factor TFIID subunit 10 [KO:K03134]
117264881  taf9; transcription initiation factor TFIID subunit 9 [KO:K14535]
117266240  taf12; transcription initiation factor TFIID subunit 12 [KO:K03126]
117266253  taf2; transcription initiation factor TFIID subunit 2 [KO:K03128]
117267335  tbpl2; TATA box-binding protein-like protein 2 isoform X1 [KO:K03120]
117267527  mnat1; CDK-activating kinase assembly factor MAT1 [KO:K10842]
117267933  gtf2f1; general transcription factor IIF subunit 1 [KO:K03138]
117268417  taf1; transcription initiation factor TFIID subunit 1 isoform X1 [KO:K03125] [EC:2.3.1.48 2.7.11.1]
117270423  tbpl1; TATA box-binding protein-like protein 1 [KO:K03120]
117270938  gtf2h5; general transcription factor IIH subunit 5 [KO:K10845]
117271011  gtf2a1; transcription initiation factor IIA subunit 1 isoform X1 [KO:K03122]
117271848  gtf2b; transcription initiation factor IIB [KO:K03124]
117272707  taf6l; TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L [KO:K03131]
Reference
PMID:16858867
  Authors
Thomas MC, Chiang CM
  Title
The general transcription machinery and general cofactors.
  Journal
Crit Rev Biochem Mol Biol 41:105-78 (2006)
DOI:10.1080/10409230600648736
Reference
PMID:12516863
  Authors
Martinez E
  Title
Multi-protein complexes in eukaryotic gene transcription.
  Journal
Plant Mol Biol 50:925-47 (2002)
DOI:10.1023/A:1021258713850
Reference
PMID:19308322
  Authors
Cler E, Papai G, Schultz P, Davidson I
  Title
Recent advances in understanding the structure and function of general transcription factor TFIID.
  Journal
Cell Mol Life Sci 66:2123-34 (2009)
DOI:10.1007/s00018-009-0009-3
Reference
PMID:10838567
  Authors
Malik S, Roeder RG.
  Title
Transcriptional regulation through Mediator-like coactivators in yeast and metazoan cells.
  Journal
Trends Biochem Sci 25:277-283 (2000)
DOI:10.1016/S0968-0004(00)01596-6
Related
pathway
ely03020  RNA polymerase
ely03420  Nucleotide excision repair
KO pathway
ko03022   

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