KEGG   Homo sapiens (human): 6633
Entry
6633              CDS       T01001                                 
Symbol
SNRPD2, SMD2, SNRPD1, Sm-D2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2 isoform 1
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6633 (SNRPD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    6633 (SNRPD2)
   03032 DNA replication proteins [BR:hsa03032]
    6633 (SNRPD2)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6633 (SNRPD2)
  U2 snRNP components
    6633 (SNRPD2)
 Complex B
  U1 snRNP components
    6633 (SNRPD2)
  U4/U6.U5 tri-snRNP components
    6633 (SNRPD2)
 Complex C
  U2 snRNP components
    6633 (SNRPD2)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6633 (SNRPD2)
SSDB
Motif
Pfam: LSM Hfq GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 6633
NCBI-ProteinID: NP_001371576
OMIM: 601061
HGNC: 11159
Ensembl: ENSP00000342374.2
UniProt: P62316
Structure
LinkDB
Position
19:complement(45687454..45692316)
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagcctcctcaacaagcccaagagtgagatgaccccagaggagctgcagaagcgagag
gaggaggaatttaacaccggtccactctctgtgctcacacagtcagtcaagaacaatacc
caagtgctcatcaactgccgcaacaataagaaactcctgggccgcgtgaaggccttcgat
aggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagt
ggcaagggcaagaagaagtccaagccagtcaacaaagaccgctacatctccaagatgttc
ctgcgcggggactcagtcatcgtggtcctgcggaacccgctcatcgccggcaagtag

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