KEGG   Homo sapiens (human): 6636
Entry
6636              CDS       T01001                                 
Symbol
SNRPF, SMF, Sm-F, snRNP-F
Name
(RefSeq) small nuclear ribonucleoprotein polypeptide F
  KO
K11098  small nuclear ribonucleoprotein F
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01963  Sm core assembly and 3 end processing of pre U1 snRNA
N01964  pre U1 snRNP import and U1 snRNP formation
N01968  Spliceosome assembly (E and A complex formation)
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
N01972  Spliceosome catalysis (branching)
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    6636 (SNRPF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6636 (SNRPF)
   03041 Spliceosome [BR:hsa03041]
    6636 (SNRPF)
   03032 DNA replication proteins [BR:hsa03032]
    6636 (SNRPF)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     6636 (SNRPF)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    6636 (SNRPF)
  U2 snRNP components
    6636 (SNRPF)
 Complex B
  U1 snRNP components
    6636 (SNRPF)
  U4/U6.U5 tri-snRNP components
    6636 (SNRPF)
 Complex C
  U2 snRNP components
    6636 (SNRPF)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     6636 (SNRPF)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 6636
NCBI-ProteinID: NP_003086
OMIM: 603541
HGNC: 11162
Ensembl: ENSG00000139343
UniProt: P62306
Structure
LinkDB
Position
12:95858952..95866140
AA seq 86 aa
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagtttacccctcaatcccaaacctttcctcaatggactaacaggaaagccagtgatg
gtgaaacttaagtggggaatggagtacaagggctatctggtatctgtagatggctacatg
aacatgcagcttgcaaatacagaagaatacatagatggagctttgtctggacatctgggt
gaagttttaataaggtgtaataatgtcctttatatcagaggtgtggaagaagaggaagaa
gatggggaaatgagagaatag

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