KEGG   Homo sapiens (human): 79003
Entry
79003             CDS       T01001                                 
Symbol
MIS12, 2510025F08Rik, KNTC2AP, MTW1, hMis12
Name
(RefSeq) MIS12 kinetochore complex component
  KO
K11543  kinetochore-associated protein MIS12
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
N01532  Kinetochore targeting of MAD1-MAD2
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    79003 (MIS12)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     MIS12 complex
      79003 (MIS12)
SSDB
Motif
Pfam: Mis12 ResIII SpecificRecomb DUF7809
Other DBs
NCBI-GeneID: 79003
NCBI-ProteinID: NP_001245146
OMIM: 609178
HGNC: 24967
Ensembl: ENSG00000167842
UniProt: Q9H081
Structure
LinkDB
Position
17:5486374..5490811
AA seq 205 aa
MSVDPMTYEAQFFGFTPQTCMLRIYIAFQDYLFEVMQAVEQVILKKLDGIPDCDISPVQI
RKCTEKFLCFMKGHFDNLFSKMEQLFLQLILRIPSNILLPEDKCKETPYSEEDFQHLQKE
IEQLQEKYKTELCTKQALLAELEEQKIVQAKLKQTLTFFDELHNVGRDHGTSDFRESLVS
LVQNSRKLQNIRDNVEKESKRLKIS
NT seq 618 nt   +upstreamnt  +downstreamnt
atgtctgtggatccaatgacctacgaggcccagttctttggcttcacgccacaaacgtgc
atgcttcggatctacattgcatttcaagactacctatttgaagtgatgcaggccgttgaa
caggttattctgaagaagctggatggcatcccagactgtgacattagcccagtgcagatt
cgcaaatgcacagagaagtttctttgcttcatgaaaggacattttgataacctttttagc
aaaatggagcaactgtttttgcagctgattttacgtattccctcaaacatcttgcttcct
gaagataaatgtaaggagacaccttatagtgaggaagattttcagcatctccagaaagaa
attgaacagttacaggagaagtacaagactgaattatgtactaagcaggcccttcttgca
gaattagaagagcaaaaaattgttcaggccaaactcaaacagacgttgactttctttgat
gagcttcataatgttggcagagatcatgggactagtgattttagggagagtttagtatcc
ctggttcagaactccagaaaactacagaacattagagacaatgtggaaaaggaatcgaaa
cgactgaaaatatcttaa

KEGG   Homo sapiens (human): 79980
Entry
79980             CDS       T01001                                 
Symbol
DSN1, C20orf172, KNL3, MIS13, dJ469A13.2, hKNL-3
Name
(RefSeq) DSN1 component of MIS12 kinetochore complex
  KO
K11544  kinetochore-associated protein DSN1
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    79980 (DSN1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     MIS12 complex
      79980 (DSN1)
SSDB
Motif
Pfam: MIS13 CA109-like
Other DBs
NCBI-GeneID: 79980
NCBI-ProteinID: NP_001138787
OMIM: 609175
HGNC: 16165
Ensembl: ENSG00000149636
UniProt: Q9H410
Structure
LinkDB
Position
20:complement(36751795..36773763)
AA seq 356 aa
MTSVTRSEIIDEKGPVMSKTHDHQLESSLSPVEVFAKTSASLEMNQGVSEERIHLGSSPK
KGGNCDLSHQERLQSKSLHLSPQEQSASYQDRRQSWRRASMKETNRRKSLHPIHQGITEL
SRSISVDLAESKRLGCLLLSSFQFSIQKLEPFLRDTKGFSLESFRAKASSLSEELKHFAD
GLETDGTLQKCFEDSNGKASDFSLEASVAEMKEYITKFSLERQTWDQLLLHYQQEAKEIL
SRGSTEAKITEVKVEPMTYLGSSQNEVLNTKPDYQKILQNQSKVFDCMELVMDELQGSVK
QLQAFMDESTQCFQKVSVQLGKRSMQQLDPSPARKLLKLQLQNPPAIHGSGSGSCQ
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgacttcagtgactagatcagagatcatagatgaaaaaggaccagtgatgtctaagact
catgatcatcaattggaatcaagtctcagtcctgtggaagtgtttgctaaaacatctgcc
tccctggagatgaatcaaggcgtttcagaggaaagaattcaccttggctctagccctaaa
aaagggggaaattgtgatctcagccaccaggaaagacttcagtcgaagtcccttcatttg
tctcctcaagaacaatctgccagttatcaagacaggaggcaatcctggcggcgagcaagt
atgaaagaaacgaaccggcggaagtcgctgcatcccattcaccagggcatcacagagctc
agccggtctatcagtgtcgatttagcagaaagcaaacggcttggctgtctcctgctttcc
agtttccagttctctattcagaaacttgaacctttcctaagggacactaagggcttcagt
cttgaaagttttagagccaaagcatcttctctttctgaagaattgaaacattttgcagac
ggactggaaactgatggaactctacaaaaatgttttgaagattcaaatggaaaagcatca
gatttttctttggaagcatctgtggctgagatgaaggaatacataacaaagttttcttta
gaacgtcagacttgggatcagctcttgcttcactaccagcaggaggctaaagagatattg
tccagaggatcaactgaggccaaaattactgaggtcaaagtggaacctatgacatatctt
gggtcttctcagaatgaagttcttaatacaaaacctgactaccagaaaatattacagaac
cagagcaaagtctttgactgtatggagttggtgatggatgaactgcaaggatcagtgaaa
cagctgcaggcctttatggatgaaagtacccagtgcttccagaaggtgtcagtacagctc
ggaaagagaagcatgcaacaattagatccctcaccagctcgaaaactgttgaagcttcag
ctacagaacccacctgccatacatggatctggatctggatcttgtcagtga

KEGG   Homo sapiens (human): 11243
Entry
11243             CDS       T01001                                 
Symbol
PMF1
Name
(RefSeq) polyamine modulated factor 1
  KO
K11546  polyamine-modulated factor 1
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    11243 (PMF1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     MIS12 complex
      11243 (PMF1)
SSDB
Motif
Pfam: Nnf1 SYCP2_ARLD DUF7603 CENPU Mod_r
Other DBs
NCBI-GeneID: 11243
NCBI-ProteinID: NP_009152
OMIM: 609176
HGNC: 9112
Ensembl: ENSG00000160783
UniProt: Q6P1K2
Structure
LinkDB
Position
1:156213007..156240042
AA seq 205 aa
MAEASSANLGSGCEEKRHEGSSSESVPPGTTISRVKLLDTMVDTFLQKLVAAGSYQRFTD
CYKCFYQLQPAMTQQIYDKFIAQLQTSIREEISDIKEEGNLEAVLNALDKIVEEGKVRKE
PAWRPSGIPEKDLHSVMAPYFLQQRDTLRRHVQKQEAENQQLADAVLAGRRQVEELQLQV
QAQQQAWQALHREQRELVAVLREPE
NT seq 618 nt   +upstreamnt  +downstreamnt
atggccgaagcaagtagcgccaatctaggcagcggctgtgaggaaaaaaggcatgagggg
tcgtcttcggaatctgtgccacccggcactaccatttcgagggtgaagctcctcgacacc
atggtggacacttttcttcagaagctggtcgccgccggcagctaccagagattcactgac
tgctataagtgcttctaccagttgcagcctgcgatgacacagcaaatctatgacaagttt
atagctcagttgcagacatctatccgggaggaaatctctgacatcaaagaggaggggaac
ctagaagctgtcttgaatgccttggataaaattgtggaagaaggcaaagtccgcaaagag
ccagcctggcgccccagcgggatcccagagaaggatctgcacagtgttatggcaccctac
ttcctgcagcaacgggacaccctgcggcgccatgtgcagaaacaggaggccgagaaccag
cagctggcagatgccgtcctggcagggcggaggcaggtggaggagctgcagctacaggtc
caggcccagcagcaggcctggcaggctctacacagagaacagagggagctggttgctgtg
ctgagggagcctgagtga

KEGG   Homo sapiens (human): 25936
Entry
25936             CDS       T01001                                 
Symbol
NSL1, C1orf48, DC8, MIS14
Name
(RefSeq) NSL1 component of MIS12 kinetochore complex
  KO
K11545  kinetochore-associated protein NSL1
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    25936 (NSL1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     MIS12 complex
      25936 (NSL1)
SSDB
Motif
Pfam: Mis14 CYP38_PsbQ-like
Other DBs
NCBI-GeneID: 25936
NCBI-ProteinID: NP_056286
OMIM: 609174
HGNC: 24548
Ensembl: ENSG00000117697
UniProt: Q96IY1 Q53FM2
Structure
LinkDB
Position
1:complement(212726153..212791777)
AA seq 281 aa
MAGSPELVVLDPPWDKELAAGTESQALVSATPREDFRVRCTSKRAVTEMLQLCGRFVQKL
GDALPEEIREPALRDAQWTFESAVQENISINGQAWQEASDNCFMDSDIKVLEDQFDEIIV
DIATKRKQYPRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETV
AKEISEAMKSLPALIEQGEGFSQVLRMQPVIHLQRIHQEVFSSCHRKPDAKPENFITQIE
TTPTETASRKTSDMVLKRKQTKDCPQRKWYPLRPKKINLDT
NT seq 846 nt   +upstreamnt  +downstreamnt
atggcggggtctcctgagttggtggtccttgaccctccatgggacaaggagctcgcggct
ggcacagagagccaggccttggtctccgccactccccgagaagactttcgggtgcgctgc
acctcgaagcgggctgtgaccgaaatgctacaactgtgcggccgcttcgtgcaaaagctc
ggggacgctctgccggaggagattcgggagcccgctctgcgagatgcgcagtggactttt
gaatcagctgtgcaagagaatatcagcattaatgggcaagcatggcaggaagcttcagat
aattgttttatggattctgacatcaaagtacttgaagatcagtttgatgaaatcatagta
gatatagccacaaaacgtaagcagtatcccagaaagatcctggaatgtgtcatcaaaacc
ataaaagcaaaacaagaaattctgaagcagtaccaccctgttgtacatccactggaccta
aaatatgaccctgatccagcccctcatatggaaaatttgaaatgcagaggggaaacagta
gcaaaggagatcagtgaagccatgaagtccttgcctgcattaattgaacaaggagaggga
ttttcccaagttctcaggatgcagcctgttatccacctccagaggattcaccaagaagtc
ttttccagttgtcataggaaaccagatgctaaacctgagaactttataacacagatagaa
accacaccaacagagactgcttccaggaaaacctctgacatggtactgaaaagaaagcaa
actaaagactgcccccagagaaaatggtatccattgcggccaaagaaaattaatcttgat
acatga

KEGG   Homo sapiens (human): 57082
Entry
57082             CDS       T01001                                 
Symbol
KNL1, AF15Q14, CASC5, CT29, D40, MCPH4, PPP1R55, Spc7, hKNL-1, hSpc105
Name
(RefSeq) kinetochore scaffold 1
  KO
K11542  protein CASC5
Organism
hsa  Homo sapiens (human)
Pathway
hsa04110  Cell cycle
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
N01529  Recruitment and formation of the MCC
Disease
H00269  Primary microcephaly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    57082 (KNL1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    57082 (KNL1)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    57082 (KNL1)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     57082 (KNL1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    KMN network proteins
     57082 (KNL1)
SSDB
Motif
Pfam: MELT Knl1_RWD_C
Other DBs
NCBI-GeneID: 57082
NCBI-ProteinID: NP_733468
OMIM: 609173
HGNC: 24054
Ensembl: ENSG00000137812
UniProt: Q8NG31
Structure
LinkDB
Position
15:40594249..40664342
AA seq 2342 aa
MDGVSSEANEENDNIERPVRRRHSSILKPPRSPLQDLRGGNERVQESNALRNKKNSRRVS
FADTIKVFQTESHMKIVRKSEMEGCSAMVPSQLQLLPPGFKRFSCLSLPETETGENLLLI
QNKKLEDNYCEITGMNTLLSAPIHTQMQQKEFSIIEHTRERKHANDQTVIFSDENQMDLT
SSHTVMITKGLLDNPISEKSTKIDTTSFLANLKLHTEDSRMKKEVNFSVDQNTSSENKID
FNDFIKRLKTGKCSAFPDVPDKENFEIPIYSKEPNSASSTHQMHVSLKEDENNSNITRLF
REKDDGMNFTQCHTANIQTLIPTSSETNSRESKGNDITIYGNDFMDLTFNHTLQILPATG
NFSEIENQTQNAMDVTTGYGTKASGNKTVFKSKQNTAFQDLSINSADKIHITRSHIMGAE
THIVSQTCNQDARILAMTPESIYSNPSIQGCKTVFYSSCNDAMEMTKCLSNMREEKNLLK
HDSNYAKMYCNPDAMSSLTEKTIYSGEENMDITKSHTVAIDNQIFKQDQSNVQIAAAPTP
EKEMMLQNLMTTSEDGKMNVNCNSVPHVSKERIQQSLSNPLSISLTDRKTELLSGENMDL
TESHTSNLGSQVPLAAYNLAPESTSESHSQSKSSSDECEEITKSRNEPFQRSDIIAKNSL
TDTWNKDKDWVLKILPYLDKDSPQSADCNQEIATSHNIVYCGGVLDKQITNRNTVSWEQS
LFSTTKPLFSSGQFSMKNHDTAISSHTVKSVLGQNSKLAEPLRKSLSNPTPDYCHDKMII
CSEEEQNMDLTKSHTVVIGFGPSELQELGKTNLEHTTGQLTTMNRQIAVKVEKCGKSPIE
KSGVLKSNCIMDVLEDESVQKPKFPKEKQNVKIWGRKSVGGPKIDKTIVFSEDDKNDMDI
TKSYTIEINHRPLLEKRDCHLVPLAGTSETILYTCRQDDMEITRSHTTALECKTVSPDEI
TTRPMDKTVVFVDNHVELEMTESHTVFIDYQEKERTDRPNFELSQRKSLGTPTVICTPTE
ESVFFPGNGESDRLVANDSQLTPLEEWSNNRGPVEVADNMELSKSATCKNIKDVQSPGFL
NEPLSSKSQRRKSLKLKNDKTIVFSENHKNDMDITQSCMVEIDNESALEDKEDFHLAGAS
KTILYSCGQDDMEITRSHTTALECKTLLPNEIAIRPMDKTVLFTDNYSDLEVTDSHTVFI
DCQATEKILEENPKFGIGKGKNLGVSFPKDNSCVQEIAEKQALAVGNKIVLHTEQKQQLF
AATNRTTNEIIKFHSAAMDEKVIGKVVDQACTLEKAQVESCQLNNRDRRNVDFTSSHATA
VCGSSDNYSCLPNVISCTDNLEGSAMLLCDKDEEKANYCPVQNDLAYANDFASEYYLESE
GQPLSAPCPLLEKEEVIQTSTKGQLDCVITLHKDQDLIKDPRNLLANQTLVYSQDLGEMT
KLNSKRVSFKLPKDQMKVYVDDIYVIPQPHFSTDQPPLPKKGQSSINKEEVILSKAGNKS
LNIIENSSAPICENKPKILNSEEWFAAACKKELKENIQTTNYNTALDFHSNSDVTKQVIQ
THVNAGEAPDPVITSNVPCFHSIKPNLNNLNGKTGEFLAFQTVHLPPLPEQLLELGNKAH
NDMHIVQATEIHNINIISSNAKDSRDEENKKSHNGAETTSLPPKTVFKDKVRRCSLGIFL
PRLPNKRNCSVTGIDDLEQIPADTTDINHLETQPVSSKDSGIGSVAGKLNLSPSQYINEE
NLPVYPDEINSSDSINIETEEKALIETYQKEISPYENKMGKTCNSQKRTWVQEEEDIHKE
KKIRKNEIKFSDTTQDREIFDHHTEEDIDKSANSVLIKNLSRTPSSCSSSLDSIKADGTS
LDFSTYRSSQMESQFLRDTICEESLREKLQDGRITIREFFILLQVHILIQKPRQSNLPGN
FTVNTPPTPEDLMLSQYVYRPKIQIYREDCEARRQKIEELKLSASNQDKLLVDINKNLWE
KMRHCSDKELKAFGIYLNKIKSCFTKMTKVFTHQGKVALYGKLVQSAQNEREKLQIKIDE
MDKILKKIDNCLTEMETETKNLEDEEKNNPVEEWDSEMRAAEKELEQLKTEEEELQRNLL
ELEVQKEQTLAQIDFMQKQRNRTEELLDQLSLSEWDVVEWSDDQAVFTFVYDTIQLTITF
EESVVGFPFLDKRYRKIVDVNFQSLLDEDQAPPSSLLVHKLIFQYVEEKESWKKTCTTQH
QLPKMLEEFSLVVHHCRLLGEEIEYLKRWGPNYNLMNIDINNNELRLLFSSSAAFAKFEI
TLFLSAYYPSVPLPSTIQNHVGNTSQDDIATILSKVPLENNYLKNVVKQIYQDLFQDCHF
YH
NT seq 7029 nt   +upstreamnt  +downstreamnt
atggatggggtgtcttcagaggctaatgaagaaaatgacaatatagagagacctgttaga
agacggcattcttcaatattgaaacccccaaggagtcctcttcaggacctcagaggtggg
aatgaaagagttcaggaatccaatgctttgagaaataagaaaaactctcgtcgagtcagc
tttgcagatactataaaggtattccagacggagtctcatatgaaaatagtgagaaagtca
gaaatggaaggctgcagtgcaatggtgccatctcagctgcaacttctgcctcctgggttt
aagcgattctcctgcctcagcctcccagaaacagaaacaggagaaaatcttcttttgata
cagaataagaaattagaagataattactgtgaaattactgggatgaacacattgctttct
gctcccattcatacccagatgcaacagaaggagttttcaattatagaacatacccgtgaa
aggaaacatgcaaatgaccagacagtcattttttcagatgaaaaccagatggacctgaca
tcaagtcacactgtaatgattaccaaaggccttttagataatcccataagtgaaaagtcc
accaagatagataccacatcatttctagctaatttaaagcttcacaccgaggactcaaga
atgaaaaaagaagtaaatttttccgtggatcaaaacacttcttcagaaaataaaatagat
ttcaatgacttcataaaaagattgaaaacaggaaaatgtagtgcttttcctgatgtgcct
gataaagaaaattttgagatacctatttattccaaggaaccgaacagtgcctcttctaca
catcaaatgcatgtatctcttaaggaagatgaaaataacagtaatattactaggctcttt
agagaaaaagatgatgggatgaatttcacccagtgtcatacagccaatattcagacattg
attcccacatccagtgagaccaactcacgggaatctaaaggtaatgatattacaatttat
ggcaatgactttatggacttgacatttaaccacactttgcagatcttacctgcaacaggt
aatttttctgaaatagaaaatcaaactcagaatgccatggatgtaacaacaggttatgga
actaaagcttcaggaaataaaacagtttttaagagtaaacaaaatactgcttttcaagac
ctttccataaactctgcagacaaaatacatattaccagaagtcatattatgggggcagaa
actcacatagtctcacagacttgtaatcaggatgccagaatattagccatgaccccagaa
tctatatattctaatccatctattcaaggttgtaagactgttttctattctagttgtaat
gatgccatggaaatgaccaaatgtctctcaaatatgagagaggagaaaaatttgctaaag
catgacagtaattatgctaaaatgtattgcaatccagatgctatgtcttctctcacagag
aaaactatttattccggagaggagaacatggacattaccaagagtcatacagttgcaata
gataatcaaatttttaaacaagatcaatcaaatgtgcaaatagcagctgcaccaacaccc
gaaaaagaaatgatgctccaaaatcttatgaccacatcagaagatgggaaaatgaatgta
aattgtaactcagttcctcatgtatctaaggaaagaatacagcagagcctgtcaaatcct
ttgtctatttcattgactgatagaaagactgaactcttatcaggtgaaaatatggatttg
actgaaagtcacacaagtaacttaggaagtcaggttcctcttgcagcttataatctagca
ccggagagtaccagtgaatctcactctcagagcaaaagctcttcagatgaatgtgaagaa
attaccaaaagtcgtaatgaaccatttcagcgatcagacataatagccaaaaacagctta
accgacacctggaacaaagacaaagattgggttttgaagattttgccctaccttgataaa
gattctcctcagtcagctgattgtaatcaggagatagcaacaagccataatatagtctac
tgtggtggagttcttgataaacaaataactaatagaaatacagtatcatgggaacaatct
ttgttttctaccacaaagccattattttcatcaggacagttctctatgaaaaatcatgat
actgctataagtagtcatacagtgaaatctgtactaggccagaattctaaactggctgag
ccactgaggaaaagtttaagcaatcccacacctgactattgccatgacaagatgattata
tgttcagaggaagagcaaaatatggatctaacaaagagccacactgtcgtcattggattt
ggtccttctgaactacaagaacttggtaaaactaatttagaacacactactggccagcta
acaacaatgaacagacagatagctgtaaaagttgaaaaatgtggtaaaagtcccatagaa
aaaagtggagtgcttaaatctaactgtattatggatgtgttagaggacgaaagtgtacag
aaacctaaatttccaaaggaaaagcaaaatgtcaaaatttggggaaggaaaagtgttggt
ggaccaaaaattgataagactattgtattttcagaagacgataagaatgatatggatatc
actaagagttatacaatagaaataaaccatagacctttattagagaaacgtgattgtcat
ttggtgccattggcaggaacttctgaaactattttatatacatgtaggcaggatgacatg
gagatcactagaagtcacacaactgccttagaatgtaaaactgtctcaccagatgaaata
actactaggcctatggacaaaactgtagtgtttgtagataatcatgttgaactagaaatg
acagagtcccatactgttttcattgactaccaagaaaaggaaagaacagacagacctaac
tttgaactatcccaaaggaaaagcctaggaacaccaacagtgatatgtactcctactgag
gagagtgttttctttccaggaaatggtgaaagtgaccgtctagtagcaaatgacagccag
ctaacccctctggaggaatggtctaataataggggccctgtagaggtagctgataacatg
gaattgtctaaatcagccacttgcaaaaacatcaaagatgtacaaagtcctggatttctg
aatgaacctctatcaagcaaaagtcagagaagaaaaagccttaagctaaaaaatgacaag
accattgtattttcagagaatcataaaaatgatatggatattacccagagttgtatggtg
gaaatagataacgaaagtgccctggaggataaagaggacttccatttggcaggggcttct
aaaactattttgtattcatgtgggcaggatgacatggagatcactaggagtcacacaact
gccttagaatgtaaaactctcctgccaaatgaaatagctattaggcccatggacaaaacc
gtattgttcacagataattacagtgatctggaagtcaccgattcccatactgttttcatt
gactgtcaagccacagagaaaatacttgaagaaaaccctaaatttggaataggaaaagga
aaaaacttgggtgtttcctttcctaaggataatagctgtgttcaagaaatcgctgaaaaa
caagcactggctgtaggaaacaaaatagttcttcacaccgagcaaaagcaacaactcttt
gctgctactaatagaactactaatgaaatcatcaaatttcatagtgctgctatggatgaa
aaggtcatagggaaagttgtagaccaggcctgtacattggaaaaagcgcaagttgaaagc
tgtcagttaaataatagagatagaagaaatgtggactttacaagtagtcatgcaactgct
gtttgtggatccagtgataattattcctgtttaccaaatgttatttcctgtactgataat
ttggagggtagtgccatgctcttatgtgataaagatgaggaaaaagccaattattgccca
gtgcaaaatgatcttgcttatgcaaatgattttgccagtgaatattacttggaatctgag
ggacagcctctctctgctccttgtcctttgttagagaaggaagaagttattcaaaccagt
accaaaggacagttagactgtgttataacactgcacaaagatcaagatctgattaaggat
ccacgaaatctattggctaatcaaactttagtatatagtcaagatctgggggagatgact
aaacttaattcaaagcgagtatcttttaagcttccaaaggatcaaatgaaagtctatgtt
gatgacatttatgttattcctcagcctcatttctcaaccgaccaacctccattacctaaa
aaaggacagagtagtatcaataaagaagaagtaatactgtctaaagctggaaataagagt
ttaaatattatagaaaattcctctgcacccatatgtgaaaacaagcccaaaatactcaat
agtgaggaatggtttgctgcagcctgtaaaaaagaactgaaggaaaatattcaaacaact
aactataatacagctctagatttccacagtaactcagacgtaactaagcaagtcattcaa
actcatgtcaatgctggagaagcaccagatcctgtaattacatctaatgttccatgtttt
catagtatcaaaccaaatctgaataatttgaatggaaaaactggagagtttttagccttt
caaactgttcatctaccaccccttccagagcaattacttgaattaggaaataaggcacac
aatgatatgcatatagtgcaagctacagaaatacataatattaacataatctccagcaat
gctaaagatagtagagatgaggaaaataaaaagtctcataatggagctgaaaccacctct
ctaccgccaaagacagtttttaaagataaagtaaggagatgttctttgggaatctttttg
cctagattgcccaacaagagaaattgtagtgtcactggtattgatgacctggaacagatt
ccagcagacacaactgatataaatcacttagaaactcagccggtctctagcaaagattca
ggcattggatctgttgcaggtaaactgaacctaagtccttctcaatatataaatgaggaa
aatcttcctgtatatcctgatgagatcaattcttcagactctattaacatagaaactgag
gaaaaggccttgattgagacataccaaaaagagatttcaccatatgaaaataaaatggga
aaaacttgcaatagccaaaaaagaacgtgggtacaagaagaagaagatattcataaggag
aaaaaaatcagaaaaaatgagattaagtttagtgatacgacacaagatcgggagattttt
gatcaccatactgaagaggatatagataaaagtgctaacagtgtattgataaaaaacctg
agcaggaccccatctagttgcagcagctctctggattcaatcaaggctgatgggacctct
ctggacttcagcacttaccgcagtagtcaaatggaatcacagtttctcagagatactatt
tgtgaagagagcttgagggagaaactccaagatgggagaataacaataagggagttcttt
atacttctccaggtccacatcttgatacagaaaccccgacagagcaatctcccaggcaat
tttactgtaaacacaccacctactccagaagacctgatgttaagtcaatatgtttaccga
cccaagatacagatttatagagaagattgtgaggctcgtcgccaaaagattgaagaatta
aagctttctgcatcgaaccaagataagctgttggttgatataaataagaacctgtgggaa
aaaatgagacactgctctgacaaagagctgaaggcctttggaatttatcttaacaaaata
aagtcatgttttaccaagatgactaaagtcttcactcaccaaggaaaagtggctctgtat
ggcaagctggtgcagtcagctcagaatgagagggagaaacttcaaataaagatagatgag
atggataaaatacttaagaagatcgataactgcctcactgagatggaaacagaaactaag
aatttggaggatgaagagaaaaacaatcctgtggaagaatgggattctgaaatgagagct
gcagaaaaagaattggaacagctgaaaactgaagaagaggagcttcaaagaaatctctta
gaactggaggtacaaaaagagcagacccttgctcaaatagactttatgcaaaaacaaaga
aatagaactgaagagctactggatcagttgagcttgtctgagtgggatgtcgttgagtgg
agtgatgatcaagctgtattcacctttgtttatgacacgatacaactcaccatcaccttt
gaagagtcagttgttggtttccctttcctggacaagcgttataggaagattgttgatgtc
aattttcaatctctgttagatgaggatcaagctcctccttcctcccttttagttcataag
cttattttccagtacgttgaagaaaaggaatcctggaagaagacatgtacaacccagcat
cagttacccaagatgcttgaagaattctcactggtagtgcaccattgcagactccttgga
gaggagattgagtatttaaagagatggggaccaaattataacctaatgaacatagatatt
aataataatgaattgagacttttattctctagctccgcagcatttgcaaagtttgaaata
actttgtttctctcagcctattatccatctgtaccattaccttccaccattcagaatcac
gttgggaacactagccaagatgatattgctaccattctatctaaagtgccactggagaac
aactacctgaagaatgtagtcaagcaaatttaccaagatctgtttcaggactgccatttc
taccactag

KEGG   Homo sapiens (human): 11130
Entry
11130             CDS       T01001                                 
Symbol
ZWINT, HZwint-1, KNTC2AP, SIP30, ZWINT1
Name
(RefSeq) ZW10 interacting kinetochore protein
  KO
K19943  ZW10 interactor
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    11130 (ZWINT)
Membrane trafficking [BR:hsa04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    11130 (ZWINT)
SSDB
Motif
Pfam: Zwint Prominin
Other DBs
NCBI-GeneID: 11130
NCBI-ProteinID: NP_008988
OMIM: 609177
HGNC: 13195
Ensembl: ENSG00000122952
UniProt: O95229
Structure
LinkDB
Position
10:complement(56357227..56361273)
AA seq 277 aa
MEAAETEAEAAALEVLAEVAGILEPVGLQEEAELPAKILVEFVVDSQKKDKLLCSQLQVA
DFLQNILAQEDTAKGLDPLASEDTSRQKAIAAKEQWKELKATYREHVEAIKIGLTKALTQ
MEEAQRKRTQLREAFEQLQAKKQMAMEKRRAVQNQWQLQQEKHLQHLAEVSAEVRERKTG
TQQELDRVFQKLGNLKQQAEQERDKLQRYQTFLQLLYTLQGKLLFPEAEAEAENLPDDKP
QQPTRPQEQSTGDTMGRDPGVSFKAVGLQPAGDVNLP
NT seq 834 nt   +upstreamnt  +downstreamnt
atggaggcagcggagacagaggcggaagctgcagccctagaggtcctggctgaggtggca
ggcatcttggaacctgtaggcctgcaggaggaggcagaactgccagccaagatcctggtt
gagtttgtggtggactctcagaagaaagacaagctgctctgcagccagcttcaggtagcg
gatttcctgcagaacatcctggctcaggaggacactgctaagggtctcgaccccttggct
tctgaagacacgagccgacagaaggcaattgcagctaaggaacaatggaaagagctgaag
gccacctacagggagcacgtagaggccatcaaaattggcctcaccaaggccctgactcag
atggaggaagcccagaggaaacggacacaactccgggaagcctttgagcagctccaggcc
aagaaacaaatggccatggagaaacgcagagcagtccagaaccagtggcagctacaacag
gagaagcatctgcagcatctggcggaggtttctgcagaggtgagggagcgtaagacaggg
actcagcaggagcttgacagggtgtttcagaaacttggaaacctgaagcagcaggcagaa
caggagcgggacaagctgcagaggtatcagaccttcctccagcttctgtataccctgcag
ggtaagctgttgttccctgaggctgaggctgaggcagagaatcttccagatgataaaccc
cagcagccgactcgaccccaggagcagagtacaggagacaccatggggagagaccctggt
gtgtccttcaaggctgttggtctacaacctgctggagatgtaaatttgccatga

KEGG   Homo sapiens (human): 80152
Entry
80152             CDS       T01001                                 
Symbol
CENPT, C16orf56, CENP-T, SSMGA
Name
(RefSeq) centromere protein T
  KO
K11512  centromere protein T
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Disease
H02607  Short stature and microcephaly with genital anomalies
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    80152 (CENPT)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     80152 (CENPT)
SSDB
Motif
Pfam: CENP-T_N CENP-T_C CENP-S CBFD_NFYB_HMF Bromo_TP Histone TFIID-18kDa
Other DBs
NCBI-GeneID: 80152
NCBI-ProteinID: NP_079358
OMIM: 611510
HGNC: 25787
Ensembl: ENSG00000102901
UniProt: Q96BT3 B3KPB2
Structure
LinkDB
Position
16:complement(67828157..67847693)
AA seq 561 aa
MADHNPDSDSTPRTLLRRVLDTADPRTPRRPRSARAGARRALLETASPRKLSGQTRTIAR
GRSHGARSVGRSAHIQASGHLEEQTPRTLLKNILLTAPESSILMPESVVKPVPAPQAVQP
SRQESSCGSLELQLPELEPPTTLAPGLLAPGRRKQRLRLSVFQQGVDQGLSLSQEPQGNA
DASSLTRSLNLTFATPLQPQSVQRPGLARRPPARRAVDVGAFLRDLRDTSLAPPNIVLED
TQPFSQPMVGSPNVYHSLPCTPHTGAEDAEQAAGRKTQSSGPGLQKNSPGKPAQFLAGEA
EEVNAFALGFLSTSSGVSGEDEVEPLHDGVEEAEKKMEEEGVSVSEMEATGAQGPSRVEE
AEGHTEVTEAEGSQGTAEADGPGASSGDEDASGRAASPESASSTPESLQARRHHQFLEPA
PAPGAAVLSSEPAEPLLVRHPPRPRTTGPRPRQDPHKAGLSHYVKLFSFYAKMPMERKAL
EMVEKCLDKYFQHLCDDLEVFAAHAGRKTVKPEDLELLMRRQGLVTDQVSLHVLVERHLP
LEYRQLLIPCAYSGNSVFPAQ
NT seq 1686 nt   +upstreamnt  +downstreamnt
atggctgaccacaaccctgacagcgactccacgccgcgcacgctgctgcgacgcgtgctg
gatacagcggacccgcgcaccccgcggcgaccccggagtgctcgggctggagcccggaga
gccctgcttgaaacggcttcccccaggaagttgagtggccaaacaaggacgatagccaga
gggcgttcccatggagccaggtctgttggcagatcggcccatattcaggccagtgggcac
ttggaggaacagacacctcggacgctgctgaagaacatcctactaactgccccagaatct
tccatcctgatgcctgagtcggtagtgaagccagtgccagcaccgcaggcggtccaaccc
tccagacaagagagcagttgcggcagcctggagctgcaacttcctgagctcgagcccccc
acaaccctggctccaggtctgctggcccctggcaggaggaaacagaggctgagactgtca
gtgtttcagcagggagtggaccaggggctgtctctctcccaagagcctcaagggaatgct
gatgcctcttccctcaccagatccctcaacctgacctttgccacacctcttcagccacag
tcagtgcagaggcctggcttggcccgcagacctccagcccgccgagctgtagacgtgggt
gcctttttgcgggatctgcgagatacttccctggctcctccaaacattgtgttggaggac
acccagccgttctctcagcccatggttggctcccccaacgtgtatcactccctgccctgc
acgcctcacactggggctgaagacgctgagcaggctgccggtcgcaagacacagagcagt
gggcctgggctgcagaagaatagccctgggaaaccagcccagtttctggcaggagaggca
gaggaggtcaatgcctttgctctgggcttcctgagcaccagcagtggtgtctctggagaa
gatgaagtagagcccttacacgatggagttgaagaggcagagaaaaagatggaagaagaa
ggtgtgagtgtgagtgaaatggaggcaacaggagcacaaggacccagcagggtagaagag
gctgagggacacacagaggtgacagaagcagagggatcccaggggactgctgaggctgac
gggccaggagcatcttcaggggatgaggatgcctctggcagggcagcaagtccagagtcg
gcctccagcacccctgagtctctccaggccaggcgacatcatcagtttcttgagccagcc
ccagcgcctggtgctgcagtcttatcttcagagcctgcagagcctctgttggtcaggcat
ccccctaggccccggaccaccggccccaggccccggcaagatccccacaaggctggactg
agccactatgtgaaactctttagcttctatgccaagatgcccatggagaggaaggctctt
gagatggtggagaagtgcctagataaatatttccagcatctttgtgatgatctggaggta
tttgctgctcatgctggccgcaagactgtgaagccagaggacctggagctgctgatgcgg
cggcagggcctggtcactgaccaagtctcactgcacgtgctagtggagcggcacctgccc
ctggagtaccggcagctgctcatcccctgtgcatacagtggcaactctgtcttccctgcc
cagtag

KEGG   Homo sapiens (human): 387103
Entry
387103            CDS       T01001                                 
Symbol
CENPW, C6orf173, CENP-W, CUG2
Name
(RefSeq) centromere protein W
  KO
K26091  centromere protein W
Organism
hsa  Homo sapiens (human)
Network
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    387103 (CENPW)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     387103 (CENPW)
SSDB
Motif
Pfam: CENP-W CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 387103
NCBI-ProteinID: NP_001012525
OMIM: 611264
HGNC: 21488
Ensembl: ENSG00000203760
UniProt: Q5EE01
Structure
LinkDB
Position
6:126340115..126483320
AA seq 88 aa
MALSTIVSQRKQIKRKAPRGFLKRVFKRKKPQLRLEKSGDLLVHLNCLLFVHRLAEESRT
NACASKCRVINKEHVLAAAKVILKKSRG
NT seq 267 nt   +upstreamnt  +downstreamnt
atggcgctgtcgaccatagtctcccagaggaagcagataaagcggaaggctccccgtggc
tttctaaagcgagtcttcaagcgaaagaagcctcaacttcgtctggagaaaagtggtgac
ttattggtccatctgaactgtttactgtttgttcatcgattagcagaagagtccaggaca
aacgcttgtgcgagtaaatgtagagtcattaacaaggagcatgtactggccgcagcaaag
gtaattctaaagaagagcagaggttag

KEGG   Homo sapiens (human): 378708
Entry
378708            CDS       T01001                                 
Symbol
CENPS, APITD1, CENP-S, FAAP16, MHF1
Name
(RefSeq) centromere protein S
  KO
K11511  centromere protein S
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    378708 (CENPS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    378708 (CENPS)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    378708 (CENPS)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Kinetochore proteins
    Centromere proteins
     378708 (CENPS)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     378708 (CENPS)
SSDB
Motif
Pfam: CENP-S CENP-T_C Histone TFIID-31kDa COMMD1_N DASH_Dad2 Bromo_TP DUF4087
Other DBs
NCBI-GeneID: 378708
NCBI-ProteinID: NP_954988
OMIM: 609130
HGNC: 23163
Ensembl: ENSG00000175279
UniProt: Q8N2Z9
Structure
LinkDB
Position
1:10430433..10442808
AA seq 138 aa
MEEEAETEEQQRFSYQQRLKAAVHYTVGCLCEEVALDKEMQFSKQTIAAISELTFRQCEN
FAKDLEMFARHAKRTTINTEDVKLLARRSNSLLKYITDKSEEIAQINLERKAQKKKKSED
GSKNSRQPAEAGVVESEN
NT seq 417 nt   +upstreamnt  +downstreamnt
atggaggaggaggcggagaccgaggagcagcagcgattctcttaccaacagaggctaaag
gcagcagttcactatactgtgggttgtctttgcgaggaagttgcattggacaaagagatg
cagttcagcaaacagaccattgcggccatttcggagctgactttccgacagtgtgaaaat
tttgccaaagaccttgaaatgtttgcaagacatgcgaaaagaaccacaattaacactgaa
gatgtgaagctcttagccaggaggagtaattcactgctaaaatacatcacagacaaaagt
gaagagattgctcagattaacctagaacgaaaagcacagaagaaaaagaagtcagaggat
ggaagcaaaaattcaaggcagccagcagaggctggagtggtggaaagtgagaattaa

KEGG   Homo sapiens (human): 201254
Entry
201254            CDS       T01001                                 
Symbol
CENPX, CENP-X, D9, FAAP10, MHF2, STRA13
Name
(RefSeq) centromere protein X
  KO
K15360  centromere protein X
Organism
hsa  Homo sapiens (human)
Pathway
hsa03460  Fanconi anemia pathway
Network
nt06508  Interstrand crosslink repair
nt06515  Regulation of kinetochore-microtubule interactions
  Element
N01464  Fanconi anemia pathway
N01525  Organization of the inner kinetochore
N01526  Organization of the outer kinetochore
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    201254 (CENPX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    201254 (CENPX)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     201254 (CENPX)
SSDB
Motif
Pfam: CENP-X CBFD_NFYB_HMF
Other DBs
NCBI-GeneID: 201254
NCBI-ProteinID: NP_001257935
OMIM: 615128
HGNC: 11422
Ensembl: ENSG00000169689
UniProt: A8MT69
Structure
LinkDB
Position
17:complement(82018703..82022878)
AA seq 81 aa
MEGAGAGSGFRKELVSRLLHLHFKDDKTKVSGDALQLMVELLKVFVVEAAVRGVRQAQAE
DALRVDVDQLEKVLPQLLLDF
NT seq 246 nt   +upstreamnt  +downstreamnt
atggagggagcaggagctggatccggcttccggaaggagctggtgagcaggctgctgcac
ctgcacttcaaggatgacaagaccaaagtgagcggggacgcgctgcagctcatggtggag
ttgctgaaggtcttcgttgtggaagcagcagtccgcggcgtgcggcaggcccaggcagaa
gacgcgctccgtgtggacgtggaccagctggagaaggtgcttccgcagctgctcctggac
ttctag

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