KEGG   PATHWAY: itr00630
Entry
itr00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ipomoea triloba (trilobed morning glory)
Class
Metabolism; Carbohydrate metabolism
Pathway map
itr00630  Glyoxylate and dicarboxylate metabolism
itr00630

Module
itr_M00012  Glyoxylate cycle [PATH:itr00630]
itr_M00532  Photorespiration [PATH:itr00630]
itr_M00621  Glycine cleavage system [PATH:itr00630]
Other DBs
GO: 0046487 0043648
Organism
Ipomoea triloba (trilobed morning glory) [GN:itr]
Gene
116006727  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
116004569  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
116002418  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
115996669  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
116002468  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
116017417  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
116032052  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
116033465  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
116009870  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
116022995  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
116011302  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
116011325  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
116000426  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
116016694  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
115996374  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
116011431  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
116003959  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
115996856  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
116030936  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
116006403  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
115996356  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
116033646  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
116022434  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
116022435  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
116011025  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
115997452  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
116016006  peroxisomal (S)-2-hydroxy-acid oxidase [KO:K11517] [EC:1.1.3.15]
116031597  catalase [KO:K03781] [EC:1.11.1.6]
116006944  catalase [KO:K03781] [EC:1.11.1.6]
116026018  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
115998617  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
116000972  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
115997645  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
116015445  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
116007628  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
116014736  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
115999232  glycerate dehydrogenase HPR, peroxisomal [KO:K15893] [EC:1.1.1.29]
116022222  phosphoglycolate phosphatase 2 isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
116022225  phosphoglycolate phosphatase 2-like isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
116010691  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
36951161  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
116007206  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
115996309  ribulose bisphosphate carboxylase small chain 8B, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
116012798  ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
116024740  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
116025572  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
116024931  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
116016836  glutamine synthetase leaf isozyme, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
116019705  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
116024837  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
115996826  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
116013956  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
115999182  glutamine synthetase cytosolic isozyme 2 [KO:K01915] [EC:6.3.1.2]
116006961  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
115996070  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
116012793  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
116026718  serine hydroxymethyltransferase 2, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
116027158  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
116028618  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
116016508  serine hydroxymethyltransferase 4 isoform X1 [KO:K00600] [EC:2.1.2.1]
116021777  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
116007130  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
116027363  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
116002050  leghemoglobin reductase [KO:K00382] [EC:1.8.1.4]
116002052  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116002053  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116033581  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
116007436  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
116028016  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116001576  leghemoglobin reductase-like [KO:K00382] [EC:1.8.1.4]
116001578  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
116026657  glycine cleavage system H protein 3, mitochondrial-like [KO:K02437]
116026728  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
116005528  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
116020124  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
116013832  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
116000884  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
116014110  uncharacterized protein LOC116014110 isoform X1 [KO:K01455] [EC:3.5.1.49]
116019426  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
115999768  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
itr00010  Glycolysis / Gluconeogenesis
itr00020  Citrate cycle (TCA cycle)
itr00030  Pentose phosphate pathway
itr00053  Ascorbate and aldarate metabolism
itr00071  Fatty acid degradation
itr00230  Purine metabolism
itr00250  Alanine, aspartate and glutamate metabolism
itr00260  Glycine, serine and threonine metabolism
itr00620  Pyruvate metabolism
itr00710  Carbon fixation by Calvin cycle
itr00750  Vitamin B6 metabolism
itr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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