KEGG   PATHWAY: marj00240
Entry
marj00240                   Pathway                                
Name
Pyrimidine metabolism - Marinobacter sp. JH2
Class
Metabolism; Nucleotide metabolism
Pathway map
marj00240  Pyrimidine metabolism
marj00240

Module
marj_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:marj00240]
marj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:marj00240]
marj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:marj00240]
Other DBs
GO: 0006220 0006213
Organism
Marinobacter sp. JH2 [GN:marj]
Gene
MARI_33130  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
MARI_33120  carA; carbamoyl-phosphate synthase small chain [KO:K01956] [EC:6.3.5.5]
MARI_29200  pyrB; aspartate carbamoyltransferase [KO:K00609] [EC:2.1.3.2]
MARI_06500  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
MARI_29210  pyrC'; dihydroorotase-like protein [KO:K01465] [EC:3.5.2.3]
MARI_08070  pyrD; Dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
MARI_23960  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
MARI_07990  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
MARI_05180  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
MARI_08750  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
MARI_19700  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
MARI_03800  yhdE; Maf-like protein YhdE [KO:K06287] [EC:3.6.1.-]
MARI_07040  pyrG; CTP synthase [KO:K01937] [EC:6.3.4.2]
MARI_07940  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
MARI_07110  surE; 5'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
MARI_16270  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
MARI_29190  pyrR; bifunctional protein PyrR [KO:K02825] [EC:2.4.2.9]
MARI_30140  ppnN; pyrimidine/purine nucleotide 5'-monophosphate nucleosidase [KO:K06966] [EC:3.2.2.10 3.2.2.-]
MARI_07260  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
MARI_08370  hypothetical protein [KO:K00525] [EC:1.17.4.1]
MARI_28340  nrdA; ribonucleoside-diphosphate reductase 1 subunit alpha [KO:K00525] [EC:1.17.4.1]
MARI_28350  nrdB; ribonucleoside-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
MARI_26670  yfbR; 5'-deoxynucleotidase YfbR [KO:K08722] [EC:3.1.3.89]
MARI_15240  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
MARI_30890  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
MARI_21230  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
MARI_32790  ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG [KO:K16066] [EC:1.1.1.381 1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
marj00030  Pentose phosphate pathway
marj00220  Arginine biosynthesis
marj00250  Alanine, aspartate and glutamate metabolism
marj00280  Valine, leucine and isoleucine degradation
marj00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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