KEGG   PATHWAY: mcoc03050
Entry
mcoc03050                   Pathway                                
Name
Proteasome - Mastomys coucha (southern multimammate mouse)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
mcoc03050  Proteasome
mcoc03050

Other DBs
GO: 0000502
Organism
Mastomys coucha (southern multimammate mouse) [GN:mcoc]
Gene
116077881  Psmd3; 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
116068387  Psmd9; 26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
116077868  Psmd12; 26S proteasome non-ATPase regulatory subunit 12 [KO:K03035]
116077281  Psmd11; 26S proteasome non-ATPase regulatory subunit 11 [KO:K03036]
116084513  Psmd6; 26S proteasome non-ATPase regulatory subunit 6 isoform X1 [KO:K03037]
116070128  Psmd7; 26S proteasome non-ATPase regulatory subunit 7 isoform X1 [KO:K03038]
116101375  Psmd13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
116090221  Psmd14; 26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
116100325  Psmd8; 26S proteasome non-ATPase regulatory subunit 8 [KO:K03031]
116098557  Sem1; 26S proteasome complex subunit SEM1 [KO:K10881]
116093388  Psmd4; 26S proteasome non-ATPase regulatory subunit 4 isoform X1 [KO:K03029]
116085728  Psmd2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
116088686  Psmd1; 26S proteasome non-ATPase regulatory subunit 1 [KO:K03032]
116091526  Adrm1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
116097517  Psmc2; 26S proteasome regulatory subunit 7 [KO:K03061]
116079645  Psmc1; 26S proteasome regulatory subunit 4 [KO:K03062]
116076748  Psmc5; 26S proteasome regulatory subunit 8 [KO:K03066]
116084504  Psmc6; 26S proteasome regulatory subunit 10B [KO:K03064]
116090454  Psmc3; 26S proteasome regulatory subunit 6A [KO:K03065]
116101900  Psmc4; 26S proteasome regulatory subunit 6B [KO:K03063]
116084847  Psme1; proteasome activator complex subunit 1 [KO:K06696]
116084368  Psme2; proteasome activator complex subunit 2 [KO:K06697]
116077994  Psme3; proteasome activator complex subunit 3 isoform X1 [KO:K06698]
116070593  Psme4; proteasome activator complex subunit 4 isoform X1 [KO:K06699]
116080102  Psma6; proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
116081974  Psma2; proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
116073836  Psma4; proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
116086864  Psma8; proteasome subunit alpha-type 8 [KO:K02731] [EC:3.4.25.1]
116091522  Psma7; proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
116093624  Psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
116102829  Psma1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
116080165  Psma3; proteasome subunit alpha type-3 isoform X1 [KO:K02727] [EC:3.4.25.1]
116077049  Psmb6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
116090105  Psmb7; proteasome subunit beta type-7 [KO:K02739] [EC:3.4.25.1]
116078462  Psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
116096647  Psmb2; proteasome subunit beta type-2 [KO:K02734] [EC:3.4.25.1]
116084899  Psmb5; proteasome subunit beta type-5 [KO:K02737] [EC:3.4.25.1]
116079278  Psmb1; proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
116093378  Psmb4; proteasome subunit beta type-4 [KO:K02736] [EC:3.4.25.1]
116075015  Psmb9; proteasome subunit beta type-9 [KO:K02741] [EC:3.4.25.1]
116070082  Psmb10; proteasome subunit beta type-10 [KO:K02733] [EC:3.4.25.1]
116074433  Psmb8; proteasome subunit beta type-8 [KO:K02740] [EC:3.4.25.1]
116084734  Psmb11; proteasome subunit beta type-11 [KO:K11598] [EC:3.4.25.1]
116076208  Ifng; interferon gamma [KO:K04687]
116091147  Psmf1; proteasome inhibitor PI31 subunit isoform X1 [KO:K06700]
116068785  Pomp; proteasome maturation protein [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
mcoc04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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