KEGG   PATHWAY: mgl03420
Entry
mgl03420                    Pathway                                
Name
Nucleotide excision repair - Malassezia globosa
Description
Nucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the NER pathway are linked to at least three diseases: xeroderma pigmentosum (XP), Cockayne syndrome (CS), and trichothiodystrophy (TTD). The repair of damaged DNA involves at least 30 polypeptides within two different sub-pathways of NER known as transcription-coupled repair (TCR-NER) and global genome repair (GGR-NER). TCR refers to the expedited repair of lesions located in the actively transcribed strand of genes by RNA polymerase II (RNAP II). In GGR-NER the first step of damage recognition involves XPC-hHR23B complex together with XPE complex (in prokaryotes, uvrAB complex). The following steps of GGR-NER and TCR-NER are similar.
Class
Genetic Information Processing; Replication and repair
Pathway map
mgl03420  Nucleotide excision repair
mgl03420

Other DBs
GO: 0006289
Organism
Malassezia globosa [GN:mgl]
Gene
MGL_0054  [KO:K10609]
MGL_0150  [KO:K04802]
MGL_0308  [KO:K03143]
MGL_0346  [KO:K10844] [EC:5.6.2.3]
MGL_0418  [KO:K02328]
MGL_0419  [KO:K02328]
MGL_0497  [KO:K10846]
MGL_0515  [KO:K02324] [EC:2.7.7.7]
MGL_0773  [KO:K03142]
MGL_0788  [KO:K03868] [EC:2.3.2.32]
MGL_0889  [KO:K03010] [EC:2.7.7.6]
MGL_0942  [KO:K03008]
MGL_1317  [KO:K10848] [EC:3.1.-.-]
MGL_1397  [KO:K03144]
MGL_1481  [KO:K03505]
MGL_1506  [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
MGL_1620  [KO:K03506] [EC:2.7.7.7]
MGL_1639  [KO:K03007]
MGL_1678  [KO:K10849]
MGL_1698  [KO:K10839]
MGL_1726  [KO:K02325] [EC:2.7.7.7]
MGL_1832  [KO:K10755]
MGL_1968  [KO:K03012]
MGL_2022  [KO:K03017]
MGL_2158  [KO:K10739]
MGL_2241  [KO:K10755]
MGL_2313  [KO:K03011]
MGL_2372  [KO:K10842]
MGL_2379  [KO:K03657] [EC:5.6.2.4]
MGL_2535  [KO:K10754]
MGL_2753  [KO:K10610]
MGL_2782  [KO:K03006] [EC:2.7.7.6]
MGL_2795  [KO:K03141]
MGL_2835  [KO:K02202] [EC:2.7.11.22 2.7.11.23]
MGL_2845  [KO:K03015]
MGL_2931  [KO:K07466]
MGL_3182  [KO:K10838]
MGL_3267  [KO:K03016]
MGL_3424  [KO:K03014]
MGL_3531  [KO:K10756]
MGL_3608  [KO:K10756]
MGL_3685  [KO:K03013]
MGL_3861  [KO:K10847]
MGL_4003  [KO:K02327] [EC:2.7.7.7]
MGL_4019  [KO:K10843] [EC:5.6.2.4]
Reference
  Authors
Sugasawa K.
  Title
[Molecular mechanism of mammalian nucleotide excision repair]
  Journal
Tanpakushitsu Kakusan Koso 46:893-901 (2001)
Reference
  Authors
Nakatsu Y.
  Title
[Transcription-coupled repair and Cockayne syndrome]
  Journal
Tanpakushitsu Kakusan Koso 46:908-15 (2001)
Reference
  Authors
Nakagawa N, Masui R, Kuramitsu S.
  Title
[Structure and function of DNA repair enzyme UvrB from Thermus thermophilus HB8]
  Journal
Tanpakushitsu Kakusan Koso 46:968-75 (2001)
Reference
  Authors
Kraemer KH, Patronas NJ, Schiffmann R, Brooks BP, Tamura D, DiGiovanna JJ.
  Title
Xeroderma pigmentosum, trichothiodystrophy and Cockayne syndrome: a complex genotype-phenotype relationship.
  Journal
Neuroscience 145:1388-96 (2007)
DOI:10.1016/j.neuroscience.2006.12.020
Reference
  Authors
Saldivar JS, Wu X, Follen M, Gershenson D.
  Title
Nucleotide excision repair pathway review I: implications in ovarian cancer and platinum sensitivity.
  Journal
Gynecol Oncol 107:S56-71 (2007)
DOI:10.1016/j.ygyno.2007.07.043
Reference
  Authors
Sugasawa K.
  Title
[DNA repair pathways involving Cul4A ubiquitin ligases]
  Journal
Tanpakushitsu Kakusan Koso 51:1339-44 (2006)
Reference
  Authors
Ito S, Ando D, Tanaka K.
  Title
[Cross-talk between DNA repair and transcription: molecular mechanism and disorders]
  Journal
Tanpakushitsu Kakusan Koso 52:1823-31 (2007)
Related
pathway
mgl03020  RNA polymerase
mgl04120  Ubiquitin mediated proteolysis
KO pathway
ko03420   

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