KEGG   PATHWAY: myd03440
Entry
myd03440                    Pathway                                
Name
Homologous recombination - Myotis davidii (David's myotis)
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
myd03440  Homologous recombination
myd03440

Other DBs
GO: 0000724
Organism
Myotis davidii (David's myotis) [GN:myd]
Gene
102752198  POLD2; DNA polymerase delta 2, accessory subunit [KO:K02328]
102754145  RAD54B; RAD54 homolog B (S. cerevisiae) [KO:K10877] [EC:5.6.2.-]
102754474  RPA4; replication protein A4 [KO:K10741]
102755072  RPA3; replication protein A3 [KO:K10740]
102755164  RAD51; RAD51 recombinase [KO:K04482]
102758635  POLD3; DNA polymerase delta 3, accessory subunit [KO:K03504]
102759577  RBBP8; RB binding protein 8, endonuclease [KO:K20773] [EC:3.1.-.-]
102760246  UIMC1; ubiquitin interaction motif containing 1 [KO:K20775]
102761610  XRCC2; X-ray repair cross complementing 2 [KO:K10879]
102761726  BRCA1; BRCA1, DNA repair associated [KO:K10605] [EC:2.3.2.27]
102761896  BRE; brain and reproductive organ-expressed (TNFRSF1A modulator) [KO:K12173]
102762180  RPA1; replication protein A1 [KO:K07466]
102763876  RAD51B; RAD51 paralog B [KO:K10869]
102764024  TOP3A; topoisomerase (DNA) III alpha [KO:K03165] [EC:5.6.2.1]
102764086  MRE11; MRE11 homolog, double strand break repair nuclease [KO:K10865]
102764679  ATM; ATM serine/threonine kinase [KO:K04728] [EC:2.7.11.1]
102765107  BARD1; BRCA1 associated RING domain 1 [KO:K10683]
102765582  RAD50; RAD50 double strand break repair protein [KO:K10866] [EC:3.6.-.-]
102765620  BLM; Bloom syndrome RecQ like helicase [KO:K10901] [EC:5.6.2.4]
102765897  BRIP1; BRCA1 interacting protein C-terminal helicase 1 [KO:K15362] [EC:5.6.2.3]
102766686  RAD51D; RAD51 paralog D [KO:K10871]
102766772  BRCC3; BRCA1/BRCA2-containing complex subunit 3 [KO:K11864] [EC:3.4.19.-]
102766840  SYCP3; synaptonemal complex protein 3 [KO:K19528]
102767779  XRCC3; X-ray repair cross complementing 3 [KO:K10880]
102767806  POLD4; DNA polymerase delta 4, accessory subunit [KO:K03505]
102768414  RAD54L; RAD54-like (S. cerevisiae) [KO:K10875] [EC:5.6.2.-]
102769261  [KO:K10871]
102769332  TOP3B; topoisomerase (DNA) III beta [KO:K03165] [EC:5.6.2.1]
102770417  MUS81; MUS81 structure-specific endonuclease subunit [KO:K08991] [EC:3.1.22.-]
102770586  BABAM1; BRISC and BRCA1 A complex member 1 [KO:K20776]
102770695  NBN; nibrin [KO:K10867]
102771017  [KO:K10871]
102771034  SSBP1; single stranded DNA binding protein 1 [KO:K03111]
102771450  FAM175A; family with sequence similarity 175 member A [KO:K20774]
102771490  RAD51C; RAD51 paralog C [KO:K10870]
102772085  TOPBP1; topoisomerase (DNA) II binding protein 1 [KO:K10728]
102772389  POLD1; DNA polymerase delta 1, catalytic subunit [KO:K02327] [EC:2.7.7.7]
102773678  EME1; essential meiotic structure-specific endonuclease 1 [KO:K10882] [EC:3.1.22.-]
102773822  BRCA2; BRCA2, DNA repair associated [KO:K08775]
102773844  RAD52; RAD52 homolog, DNA repair protein [KO:K10873]
102774538  RPA2; replication protein A2 [KO:K10739]
102775014  SEM1; SEM1, 26S proteasome complex subunit [KO:K10881]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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