KEGG   PATHWAY: nte04111
Entry
nte04111                    Pathway                                
Name
Cell cycle - yeast - Neurospora tetrasperma
Description
Mitotic cell cycle progression is accomplished through a reproducible sequence of events, DNA replication (S phase) and mitosis (M phase) separated temporally by gaps (G1 and G2 phases). G1, S, and G2 phases are collectively known as interphase. In yeast Cdc28 is the catalytic subunit of the cyclin-dependent kinase (CDK). At G1 phase Cdc28 associates with G1-cyclins Cln1 to Cln3, while B-type cyclins Clb1 to Clb6 regulate Cdc28 during S, G2, and M phases. Cln3/Cdc28 activity is required for cells to pass through 'start', the commitment point in G1. When Cln3/Cdc28 accumulates more than a certain threshold, SBF (Swi4/Swi6) and MBF (Mbp1/Swi6) are activated, promoting transcription of Cln1, Cln2, and other genes required for S-phase progression. Cln1 and Cln2 interacting with Cdc28 promote activation of B-type cyclin associated CDK, which drives DNA replication and entry into mitosis. Specifically, Cdc28 association with Clb2 and Clb1 promotes entry into mitosis. Cells suffering from DNA damage, spindle misorientation, or spindle assembly defect do not undergo the metaphase-anaphase transition for chromosome segregation and fail to exit from mitosis. The spindle assembly checkpoint activates Mad2, which in turn prevents chromosome segregation by inhibiting degradation of the securin Pds1. Moreover, Pds1 is phosphorylated and stabilized in response to DNA damage in a Chk1-dependent manner. The spindle checkpoint is also involved in the Cdc14 release from the nucleolus. Cdc14 dephosphorylates Swi5, Sic1, and Cdh1, leading to inhibition of Cdc28 and degradation of cyclin required for mitotic exit.
Class
Cellular Processes; Cell growth and death
Pathway map
nte04111  Cell cycle - yeast
nte04111

Other DBs
GO: 0000278
Organism
Neurospora tetrasperma [GN:nte]
Gene
NEUTE1DRAFT101916  NEUTE1DRAFT_101916; hypothetical protein [KO:K06653]
NEUTE1DRAFT106551  NEUTE1DRAFT_106551; hypothetical protein [KO:K06676]
NEUTE1DRAFT111309  NEUTE1DRAFT_111309; hypothetical protein [KO:K02608]
NEUTE1DRAFT114358  NEUTE1DRAFT_114358; hypothetical protein [KO:K02216] [EC:2.7.11.1]
NEUTE1DRAFT116888  NEUTE1DRAFT_116888; ring-box 1 [KO:K03868] [EC:2.3.2.32]
NEUTE1DRAFT117101  NEUTE1DRAFT_117101; protein phosphatase PP2A regulatory subunit A [KO:K03456]
NEUTE1DRAFT117111  NEUTE1DRAFT_117111; hypothetical protein [KO:K03094]
NEUTE1DRAFT117829  NEUTE1DRAFT_117829; MAP kinase [KO:K04371] [EC:2.7.11.24]
NEUTE1DRAFT118085  NEUTE1DRAFT_118085; hypothetical protein [KO:K06656]
NEUTE1DRAFT119738  NEUTE1DRAFT_119738; hypothetical protein [KO:K09173]
NEUTE1DRAFT119791  NEUTE1DRAFT_119791; hypothetical protein [KO:K18669] [EC:2.7.12.1]
NEUTE1DRAFT119929  NEUTE1DRAFT_119929; hypothetical protein [KO:K03364]
NEUTE1DRAFT120018  NEUTE1DRAFT_120018; hypothetical protein [KO:K03355]
NEUTE1DRAFT120574  NEUTE1DRAFT_120574; hypothetical protein [KO:K06682]
NEUTE1DRAFT121192  NEUTE1DRAFT_121192; hypothetical protein [KO:K06679]
NEUTE1DRAFT121631  NEUTE1DRAFT_121631; hypothetical protein [KO:K06672]
NEUTE1DRAFT121681  NEUTE1DRAFT_121681; hypothetical protein [KO:K02542] [EC:5.6.2.3]
NEUTE1DRAFT122482  NEUTE1DRAFT_122482; hypothetical protein [KO:K03351]
NEUTE1DRAFT122957  NEUTE1DRAFT_122957; hypothetical protein [KO:K06685]
NEUTE1DRAFT123527  NEUTE1DRAFT_123527; hypothetical protein [KO:K02214] [EC:2.7.11.1]
NEUTE1DRAFT123623  NEUTE1DRAFT_123623; hypothetical protein [KO:K02307]
NEUTE1DRAFT125336  NEUTE1DRAFT_125336; hypothetical protein [KO:K02219]
NEUTE1DRAFT126056  NEUTE1DRAFT_126056; hypothetical protein [KO:K02179]
NEUTE1DRAFT126317  NEUTE1DRAFT_126317; G2/mitotic-specific cyclin-B [KO:K23469]
NEUTE1DRAFT126387  NEUTE1DRAFT_126387; hypothetical protein [KO:K02605]
NEUTE1DRAFT126555  NEUTE1DRAFT_126555; hypothetical protein [KO:K02555] [EC:3.1.3.48]
NEUTE1DRAFT126784  NEUTE1DRAFT_126784; hypothetical protein [KO:K06662]
NEUTE1DRAFT127159  NEUTE1DRAFT_127159; hypothetical protein [KO:K02540] [EC:5.6.2.3]
NEUTE1DRAFT127160  NEUTE1DRAFT_127160; hypothetical protein [KO:K03114] [EC:2.7.11.1]
NEUTE1DRAFT127519  NEUTE1DRAFT_127519; hypothetical protein [KO:K03353]
NEUTE1DRAFT127687  NEUTE1DRAFT_127687; hypothetical protein [KO:K02209] [EC:5.6.2.3]
NEUTE1DRAFT128482  NEUTE1DRAFT_128482; hypothetical protein [KO:K02180]
NEUTE1DRAFT130633  NEUTE1DRAFT_130633; hypothetical protein [KO:K02607]
NEUTE1DRAFT130887  NEUTE1DRAFT_130887; hypothetical protein [KO:K06677]
NEUTE1DRAFT131523  NEUTE1DRAFT_131523; mitotic spindle checkpoint component MAD2 [KO:K02537]
NEUTE1DRAFT132169  NEUTE1DRAFT_132169; hypothetical protein [KO:K03361]
NEUTE1DRAFT133197  NEUTE1DRAFT_133197; tyrosine-protein phosphatase CDC14 [KO:K06639] [EC:3.1.3.16 3.1.3.48]
NEUTE1DRAFT133979  NEUTE1DRAFT_133979; hypothetical protein [KO:K06641] [EC:2.7.11.1]
NEUTE1DRAFT142725  NEUTE1DRAFT_142725; protein phosphatase 2A regulatory B subunit [KO:K04354]
NEUTE1DRAFT144181  NEUTE1DRAFT_144181; hypothetical protein [KO:K06671]
NEUTE1DRAFT146182  NEUTE1DRAFT_146182; hypothetical protein [KO:K06678]
NEUTE1DRAFT146400  NEUTE1DRAFT_146400; hypothetical protein [KO:K02365] [EC:3.4.22.49]
NEUTE1DRAFT149499  NEUTE1DRAFT_149499; hypothetical protein [KO:K03352]
NEUTE1DRAFT149762  NEUTE1DRAFT_149762; hypothetical protein [KO:K02830] [EC:3.1.11.2]
NEUTE1DRAFT28197  NEUTE1DRAFT_28197; hypothetical protein [KO:K03358]
NEUTE1DRAFT42617  NEUTE1DRAFT_42617; sulfur controller-2 protein [KO:K10259]
NEUTE1DRAFT44798  NEUTE1DRAFT_44798; hypothetical protein [KO:K03357]
NEUTE1DRAFT57489  NEUTE1DRAFT_57489; hypothetical protein [KO:K06636]
NEUTE1DRAFT59886  NEUTE1DRAFT_59886; Serine/threonine-protein phosphatase PP2A catalytic subunit [KO:K04382] [EC:3.1.3.16]
NEUTE1DRAFT60169  NEUTE1DRAFT_60169; hypothetical protein [KO:K02606]
NEUTE1DRAFT62633  NEUTE1DRAFT_62633; hypothetical protein [KO:K06666]
NEUTE1DRAFT63265  NEUTE1DRAFT_63265; hypothetical protein [KO:K03350]
NEUTE1DRAFT63958  NEUTE1DRAFT_63958; negative regulator of the PHO system [KO:K06655] [EC:2.7.11.22]
NEUTE1DRAFT64002  NEUTE1DRAFT_64002; hypothetical protein [KO:K06669]
NEUTE1DRAFT65565  NEUTE1DRAFT_65565; hypothetical protein [KO:K06665]
NEUTE1DRAFT70297  NEUTE1DRAFT_70297; hypothetical protein [KO:K12412]
NEUTE1DRAFT71579  NEUTE1DRAFT_71579; hypothetical protein [KO:K08866] [EC:2.7.12.1]
NEUTE1DRAFT72223  NEUTE1DRAFT_72223; hypothetical protein [KO:K06670]
NEUTE1DRAFT73454  NEUTE1DRAFT_73454; cell division control protein 54 [KO:K02212] [EC:5.6.2.3]
NEUTE1DRAFT73917  NEUTE1DRAFT_73917; hypothetical protein [KO:K02603]
NEUTE1DRAFT74112  NEUTE1DRAFT_74112; hypothetical protein [KO:K03349]
NEUTE1DRAFT74892  NEUTE1DRAFT_74892; hypothetical protein [KO:K06647]
NEUTE1DRAFT75093  NEUTE1DRAFT_75093; hypothetical protein [KO:K11272]
NEUTE1DRAFT76086  NEUTE1DRAFT_76086; hypothetical protein [KO:K02604]
NEUTE1DRAFT78781  NEUTE1DRAFT_78781; hypothetical protein [KO:K06674]
NEUTE1DRAFT79505  NEUTE1DRAFT_79505; hypothetical protein [KO:K06628]
NEUTE1DRAFT79694  NEUTE1DRAFT_79694; hypothetical protein [KO:K02541] [EC:5.6.2.3]
NEUTE1DRAFT80573  NEUTE1DRAFT_80573; hypothetical protein [KO:K03347]
NEUTE1DRAFT81186  NEUTE1DRAFT_81186; hypothetical protein [KO:K03361]
NEUTE1DRAFT83626  NEUTE1DRAFT_83626; hypothetical protein [KO:K02516] [EC:2.1.1.320]
NEUTE1DRAFT86821  NEUTE1DRAFT_86821; hypothetical protein [KO:K03348]
NEUTE1DRAFT87303  NEUTE1DRAFT_87303; cell division control protein 2 [KO:K04563] [EC:2.7.11.22]
NEUTE1DRAFT88262  NEUTE1DRAFT_88262; hypothetical protein [KO:K02309]
NEUTE1DRAFT88816  NEUTE1DRAFT_88816; DNA replication licensing factor mcm7 [KO:K02210] [EC:5.6.2.3]
NEUTE1DRAFT88997  NEUTE1DRAFT_88997; hypothetical protein [KO:K06684] [EC:2.7.11.-]
NEUTE1DRAFT90495  NEUTE1DRAFT_90495; hypothetical protein [KO:K02178] [EC:2.7.11.1]
NEUTE1DRAFT91974  NEUTE1DRAFT_91974; WD-repeat-containing protein slp1 [KO:K03363]
NEUTE1DRAFT93253  NEUTE1DRAFT_93253; hypothetical protein [KO:K02213]
NEUTE1DRAFT98020  NEUTE1DRAFT_98020; hypothetical protein [KO:K03360]
Compound
C00009  Orthophosphate
C00575  3',5'-Cyclic AMP
Reference
  Authors
Devault A, Vallen EA, Yuan T, Green S, Bensimon A, Schwob E
  Title
Identification of Tah11/Sid2 as the ortholog of the replication licensing factor Cdt1 in Saccharomyces cerevisiae.
  Journal
Curr Biol 12:689-94 (2002)
DOI:10.1016/S0960-9822(02)00768-6
Reference
  Authors
de Bruin RA, McDonald WH, Kalashnikova TI, Yates J 3rd, Wittenberg C
  Title
Cln3 activates G1-specific transcription via phosphorylation of the SBF bound repressor Whi5.
  Journal
Cell 117:887-98 (2004)
DOI:10.1016/j.cell.2004.05.025
Reference
  Authors
Costanzo M, Nishikawa JL, Tang X, Millman JS, Schub O, Breitkreuz K, Dewar D, Rupes I, Andrews B, Tyers M
  Title
CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast.
  Journal
Cell 117:899-913 (2004)
DOI:10.1016/j.cell.2004.05.024
Reference
  Authors
Pramila T, Miles S, GuhaThakurta D, Jemiolo D, Breeden LL
  Title
Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle.
  Journal
Genes Dev 16:3034-45 (2002)
DOI:10.1101/gad.1034302
Reference
  Authors
Schwickart M, Havlis J, Habermann B, Bogdanova A, Camasses A, Oelschlaegel T, Shevchenko A, Zachariae W
  Title
Swm1/Apc13 is an evolutionarily conserved subunit of the anaphase-promoting complex stabilizing the association of Cdc16 and Cdc27.
  Journal
Mol Cell Biol 24:3562-76 (2004)
DOI:10.1128/MCB.24.8.3562-3576.2004
Reference
  Authors
Penkner AM, Prinz S, Ferscha S, Klein F
  Title
Mnd2, an essential antagonist of the anaphase-promoting complex during meiotic prophase.
  Journal
Cell 120:789-801 (2005)
DOI:10.1016/j.cell.2005.01.017
Reference
  Authors
Pesin JA, Orr-Weaver TL
  Title
Regulation of APC/C activators in mitosis and meiosis.
  Journal
Annu Rev Cell Dev Biol 24:475-99 (2008)
DOI:10.1146/annurev.cellbio.041408.115949
Reference
PMID:7588610
  Authors
Dirick L, Bohm T, Nasmyth K
  Title
Roles and regulation of Cln-Cdc28 kinases at the start of the cell cycle of Saccharomyces cerevisiae.
  Journal
EMBO J 14:4803-13 (1995)
DOI:10.1002/j.1460-2075.1995.tb00162.x
Reference
  Authors
Bahler J
  Title
Cell-cycle control of gene expression in budding and fission yeast.
  Journal
Annu Rev Genet 39:69-94 (2005)
DOI:10.1146/annurev.genet.39.110304.095808
Reference
PMID:8066461
  Authors
Peter M, Herskowitz I
  Title
Direct inhibition of the yeast cyclin-dependent kinase Cdc28-Cln by Far1.
  Journal
Science 265:1228-31 (1994)
DOI:10.1126/science.8066461
Reference
PMID:9367986
  Authors
Henchoz S, Chi Y, Catarin B, Herskowitz I, Deshaies RJ, Peter M
  Title
Phosphorylation- and ubiquitin-dependent degradation of the cyclin-dependent kinase inhibitor Far1p in budding yeast.
  Journal
Genes Dev 11:3046-60 (1997)
DOI:10.1101/gad.11.22.3046
Reference
PMID:9346239
  Authors
Feldman RM, Correll CC, Kaplan KB, Deshaies RJ
  Title
A complex of Cdc4p, Skp1p, and Cdc53p/cullin catalyzes ubiquitination of the phosphorylated CDK inhibitor Sic1p.
  Journal
Cell 91:221-30 (1997)
DOI:10.1016/S0092-8674(00)80404-3
Reference
PMID:7954792
  Authors
Schwob E, Bohm T, Mendenhall MD, Nasmyth K
  Title
The B-type cyclin kinase inhibitor p40SIC1 controls the G1 to S transition in S. cerevisiae.
  Journal
Cell 79:233-44 (1994)
DOI:10.1016/0092-8674(94)90193-7
Reference
PMID:9841670
  Authors
Mendenhall MD, Hodge AE
  Title
Regulation of Cdc28 cyclin-dependent protein kinase activity during the cell cycle of the yeast Saccharomyces cerevisiae.
  Journal
Microbiol Mol Biol Rev 62:1191-243 (1998)
Reference
  Authors
Zachariae W, Nasmyth K
  Title
Whose end is destruction: cell division and the anaphase-promoting complex.
  Journal
Genes Dev 13:2039-58 (1999)
DOI:10.1101/gad.13.16.2039
Reference
  Authors
Jares P, Donaldson A, Blow JJ
  Title
The Cdc7/Dbf4 protein kinase: target of the S phase checkpoint?
  Journal
EMBO Rep 1:319-22 (2000)
DOI:10.1093/embo-reports/kvd076
Reference
  Authors
Elsasser S, Chi Y, Yang P, Campbell JL
  Title
Phosphorylation controls timing of Cdc6p destruction: A biochemical analysis.
  Journal
Mol Biol Cell 10:3263-77 (1999)
DOI:10.1091/mbc.10.10.3263
Reference
  Authors
Skowyra D, Koepp DM, Kamura T, Conrad MN, Conaway RC, Conaway JW, Elledge SJ, Harper JW
  Title
Reconstitution of G1 cyclin ubiquitination with complexes containing SCFGrr1 and Rbx1.
  Journal
Science 284:662-5 (1999)
DOI:10.1126/science.284.5414.662
Reference
  Authors
Mouillon JM, Persson BL
  Title
New aspects on phosphate sensing and signalling in Saccharomyces cerevisiae.
  Journal
FEMS Yeast Res 6:171-6 (2006)
DOI:10.1111/j.1567-1364.2006.00036.x
Reference
  Authors
Bean JM, Siggia ED, Cross FR
  Title
High functional overlap between MluI cell-cycle box binding factor and Swi4/6 cell-cycle box binding factor in the G1/S transcriptional program in Saccharomyces cerevisiae.
  Journal
Genetics 171:49-61 (2005)
DOI:10.1534/genetics.105.044560
Reference
PMID:9024629
  Authors
Deshaies RJ
  Title
Phosphorylation and proteolysis: partners in the regulation of cell division in budding yeast.
  Journal
Curr Opin Genet Dev 7:7-16 (1997)
DOI:10.1016/S0959-437X(97)80103-7
Reference
  Authors
Asano S, Park JE, Sakchaisri K, Yu LR, Song S, Supavilai P, Veenstra TD, Lee KS
  Title
Concerted mechanism of Swe1/Wee1 regulation by multiple kinases in budding yeast.
  Journal
EMBO J 24:2194-204 (2005)
DOI:10.1038/sj.emboj.7600683
Reference
PMID:9716410
  Authors
Kaiser P, Sia RA, Bardes EG, Lew DJ, Reed SI
  Title
Cdc34 and the F-box protein Met30 are required for degradation of the Cdk-inhibitory kinase Swe1.
  Journal
Genes Dev 12:2587-97 (1998)
DOI:10.1101/gad.12.16.2587
Reference
PMID:9925642
  Authors
Barral Y, Parra M, Bidlingmaier S, Snyder M
  Title
Nim1-related kinases coordinate cell cycle progression with the organization of the peripheral cytoskeleton in yeast.
  Journal
Genes Dev 13:176-87 (1999)
DOI:10.1101/gad.13.2.176
Reference
  Authors
Taylor SS
  Title
Chromosome segregation: dual control ensures fidelity.
  Journal
Curr Biol 9:R562-4 (1999)
DOI:10.1016/S0960-9822(99)80355-8
Reference
  Authors
Lew DJ, Burke DJ
  Title
The spindle assembly and spindle position checkpoints.
  Journal
Annu Rev Genet 37:251-82 (2003)
DOI:10.1146/annurev.genet.37.042203.120656
Reference
  Authors
Simanis V
  Title
Events at the end of mitosis in the budding and fission yeasts.
  Journal
J Cell Sci 116:4263-75 (2003)
DOI:10.1242/jcs.00807
Reference
PMID:8131744
  Authors
Toyn JH, Johnston LH
  Title
The Dbf2 and Dbf20 protein kinases of budding yeast are activated after the metaphase to anaphase cell cycle transition.
  Journal
EMBO J 13:1103-13 (1994)
DOI:10.1002/j.1460-2075.1994.tb06359.x
Reference
  Authors
Amon A
  Title
Together until separin do us part.
  Journal
Nat Cell Biol 3:E12-4 (2001)
DOI:10.1038/35050642
Reference
  Authors
Ciosk R, Shirayama M, Shevchenko A, Tanaka T, Toth A, Shevchenko A, Nasmyth K
  Title
Cohesin's binding to chromosomes depends on a separate complex consisting of Scc2 and Scc4 proteins.
  Journal
Mol Cell 5:243-54 (2000)
DOI:10.1016/S1097-2765(00)80420-7
Reference
  Authors
Freeman L, Aragon-Alcaide L, Strunnikov A
  Title
The condensin complex governs chromosome condensation and mitotic transmission of rDNA.
  Journal
J Cell Biol 149:811-24 (2000)
DOI:10.1083/jcb.149.4.811
Reference
  Authors
Fu Y, Pastushok L, Xiao W
  Title
DNA damage-induced gene expression in Saccharomyces cerevisiae.
  Journal
FEMS Microbiol Rev 32:908-26 (2008)
DOI:10.1111/j.1574-6976.2008.00126.x
Reference
  Authors
Friedel AM, Pike BL, Gasser SM
  Title
ATR/Mec1: coordinating fork stability and repair.
  Journal
Curr Opin Cell Biol 21:237-44 (2009)
DOI:10.1016/j.ceb.2009.01.017
Reference
  Authors
Chen SH, Zhou H
  Title
Reconstitution of Rad53 activation by Mec1 through adaptor protein Mrc1.
  Journal
J Biol Chem 284:18593-604 (2009)
DOI:10.1074/jbc.M109.018242
Reference
  Authors
Amon A
  Title
A decade of Cdc14--a personal perspective. Delivered on 9 July 2007 at the 32nd FEBS Congress in Vienna, Austria.
  Journal
FEBS J 275:5774-84 (2008)
DOI:10.1111/j.1742-4658.2008.06693.x
Related
pathway
nte04120  Ubiquitin mediated proteolysis
KO pathway
ko04111   

DBGET integrated database retrieval system