KEGG   PATHWAY: orm00630
Entry
orm00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Oricola thermophila
Class
Metabolism; Carbohydrate metabolism
Pathway map
orm00630  Glyoxylate and dicarboxylate metabolism
orm00630

Module
orm_M00012  Glyoxylate cycle [PATH:orm00630]
orm_M00621  Glycine cleavage system [PATH:orm00630]
orm_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:orm00630]
Other DBs
GO: 0046487 0043648
Organism
Oricola thermophila [GN:orm]
Gene
HTY61_01455  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HTY61_17375  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HTY61_18075  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HTY61_15310  malate synthase G [KO:K01638] [EC:2.3.3.9]
HTY61_16570  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HTY61_06395  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HTY61_16320  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HTY61_00410  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HTY61_07410  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
HTY61_13160  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HTY61_17455  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HTY61_17460  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HTY61_05570  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
HTY61_02995  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
HTY61_02980  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
HTY61_03000  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HTY61_12650  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HTY61_12645  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HTY61_12635  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HTY61_14200  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
HTY61_13840  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HTY61_03600  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HTY61_03800  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HTY61_06920  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HTY61_08585  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HTY61_12815  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HTY61_12875  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HTY61_07690  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HTY61_08555  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HTY61_08545  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HTY61_06800  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HTY61_16600  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HTY61_08550  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HTY61_17905  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
HTY61_18575  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HTY61_01920  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
HTY61_01910  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HTY61_01905  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
HTY61_01900  formate dehydrogenase subunit gamma [KO:K00127]
HTY61_03585  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
HTY61_03535  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
orm00010  Glycolysis / Gluconeogenesis
orm00020  Citrate cycle (TCA cycle)
orm00030  Pentose phosphate pathway
orm00053  Ascorbate and aldarate metabolism
orm00071  Fatty acid degradation
orm00230  Purine metabolism
orm00250  Alanine, aspartate and glutamate metabolism
orm00260  Glycine, serine and threonine metabolism
orm00620  Pyruvate metabolism
orm00710  Carbon fixation by Calvin cycle
orm00750  Vitamin B6 metabolism
orm00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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