KEGG   PATHWAY: pagr03440
Entry
pagr03440                   Pathway                                
Name
Homologous recombination - Permianibacter aggregans
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
pagr03440  Homologous recombination
pagr03440

Other DBs
GO: 0000724
Organism
Permianibacter aggregans [GN:pagr]
Gene
E2H98_03240  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
E2H98_03905  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
E2H98_06370  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
E2H98_06965  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
E2H98_09425  recF; DNA replication/repair protein RecF [KO:K03629]
E2H98_09430  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
E2H98_09880  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
E2H98_12030  [KO:K04066] [EC:5.6.2.4]
E2H98_12340  [KO:K02342] [EC:2.7.7.7]
E2H98_14820  ssb; single-stranded DNA-binding protein [KO:K03111]
E2H98_15965  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
E2H98_15970  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
E2H98_15975  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
E2H98_16840  [KO:K02342] [EC:2.7.7.7]
E2H98_16965  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
E2H98_17075  recO; DNA repair protein RecO [KO:K03584]
E2H98_17580  [KO:K02339] [EC:2.7.7.7]
E2H98_17750  recA; recombinase RecA [KO:K03553]
E2H98_18070  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
E2H98_18625  [KO:K02343] [EC:2.7.7.7]
E2H98_18635  recR; recombination protein RecR [KO:K06187]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

DBGET integrated database retrieval system