KEGG   PATHWAY: park03440
Entry
park03440                   Pathway                                
Name
Homologous recombination - Paralcaligenes sp. KSB-10
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
park03440  Homologous recombination
park03440

Other DBs
GO: 0000724
Organism
Paralcaligenes sp. KSB-10 [GN:park]
Gene
LSG25_01330  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
LSG25_02140  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
LSG25_02875  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
LSG25_03870  recA; recombinase RecA [KO:K03553]
LSG25_06205  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
LSG25_06430  [KO:K02339] [EC:2.7.7.7]
LSG25_06450  recO; DNA repair protein RecO [KO:K03584]
LSG25_07575  recR; recombination mediator RecR [KO:K06187]
LSG25_07585  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
LSG25_08305  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
LSG25_08570  priB; primosomal replication protein N [KO:K02686]
LSG25_08750  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
LSG25_10415  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
LSG25_10420  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
LSG25_10425  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
LSG25_11485  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
LSG25_15890  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
LSG25_16810  ssb; single-stranded DNA-binding protein [KO:K03111]
LSG25_18170  [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   

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