KEGG   PATHWAY: abv00630
Entry
abv00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Agaricus bisporus var. bisporus H97
Class
Metabolism; Carbohydrate metabolism
Pathway map
abv00630  Glyoxylate and dicarboxylate metabolism
abv00630

Module
abv_M00012  Glyoxylate cycle [PATH:abv00630]
abv_M00621  Glycine cleavage system [PATH:abv00630]
Other DBs
GO: 0046487 0043648
Organism
Agaricus bisporus var. bisporus H97 [GN:abv]
Gene
AGABI2DRAFT193793  AGABI2DRAFT_193793; isocitrate lyase icl [KO:K01637] [EC:4.1.3.1]
AGABI2DRAFT189483  AGABI2DRAFT_189483; hypothetical protein [KO:K01637] [EC:4.1.3.1]
AGABI2DRAFT194754  AGABI2DRAFT_194754; hypothetical protein [KO:K01895] [EC:6.2.1.1]
AGABI2DRAFT188880  AGABI2DRAFT_188880; malate synthase [KO:K01638] [EC:2.3.3.9]
AGABI2DRAFT192140  AGABI2DRAFT_192140; hypothetical protein [KO:K00026] [EC:1.1.1.37]
AGABI2DRAFT187815  AGABI2DRAFT_187815; NAD-malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
AGABI2DRAFT190539  AGABI2DRAFT_190539; hypothetical protein [KO:K01647] [EC:2.3.3.1]
AGABI2DRAFT116105  AGABI2DRAFT_116105; citrate synthase [KO:K01647] [EC:2.3.3.1]
AGABI2DRAFT191163  AGABI2DRAFT_191163; peroxysomal citrate synthase [KO:K01647] [EC:2.3.3.1]
AGABI2DRAFT77333  AGABI2DRAFT_77333; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AGABI2DRAFT77363  AGABI2DRAFT_77363; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AGABI2DRAFT191802  AGABI2DRAFT_191802; 3-ketoacyl-CoA-thiolase peroxisomal [KO:K00626] [EC:2.3.1.9]
AGABI2DRAFT115586  CAT1; catalase [KO:K03781] [EC:1.11.1.6]
AGABI2DRAFT200291  CAT3; catalase [KO:K03781] [EC:1.11.1.6]
AGABI2DRAFT239410  CAT2; catalase [KO:K03781] [EC:1.11.1.6]
AGABI2DRAFT151018  AGABI2DRAFT_151018; hypothetical protein [KO:K00015] [EC:1.1.1.26]
AGABI2DRAFT120752  AGABI2DRAFT_120752; hypothetical protein [KO:K00049] [EC:1.1.1.79 1.1.1.81]
AGABI2DRAFT151665  AGABI2DRAFT_151665; hypothetical protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AGABI2DRAFT180088  AGABI2DRAFT_180088; hypothetical protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AGABI2DRAFT135514  AGABI2DRAFT_135514; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AGABI2DRAFT190294  AGABI2DRAFT_190294; hypothetical protein [KO:K01915] [EC:6.3.1.2]
AGABI2DRAFT116408  AGABI2DRAFT_116408; hypothetical protein [KO:K00600] [EC:2.1.2.1]
AGABI2DRAFT138134  AGABI2DRAFT_138134; hypothetical protein [KO:K00600] [EC:2.1.2.1]
AGABI2DRAFT213758  AGABI2DRAFT_213758; hypothetical protein [KO:K00281] [EC:1.4.4.2]
AGABI2DRAFT193044  AGABI2DRAFT_193044; hypothetical protein [KO:K00605] [EC:2.1.2.10]
AGABI2DRAFT193748  AGABI2DRAFT_193748; hypothetical protein [KO:K00382] [EC:1.8.1.4]
AGABI2DRAFT239523  AGABI2DRAFT_239523; glycine cleavage H protein [KO:K02437]
AGABI2DRAFT185525  AGABI2DRAFT_185525; hypothetical protein [KO:K15918] [EC:2.7.1.31]
AGABI2DRAFT191181  AGABI2DRAFT_191181; hypothetical protein [KO:K18123] [EC:4.1.3.16]
AGABI2DRAFT190432  AGABI2DRAFT_190432; hypothetical protein [KO:K18123] [EC:4.1.3.16]
AGABI2DRAFT150620  AGABI2DRAFT_150620; hypothetical protein [KO:K00122] [EC:1.17.1.9]
AGABI2DRAFT177041  AGABI2DRAFT_177041; hypothetical protein [KO:K01455] [EC:3.5.1.49]
AGABI2DRAFT147967  AGABI2DRAFT_147967; hypothetical protein [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
abv00010  Glycolysis / Gluconeogenesis
abv00020  Citrate cycle (TCA cycle)
abv00030  Pentose phosphate pathway
abv00053  Ascorbate and aldarate metabolism
abv00071  Fatty acid degradation
abv00230  Purine metabolism
abv00250  Alanine, aspartate and glutamate metabolism
abv00260  Glycine, serine and threonine metabolism
abv00620  Pyruvate metabolism
abv00710  Carbon fixation by Calvin cycle
abv00750  Vitamin B6 metabolism
abv00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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