KEGG   PATHWAY: acid00630
Entry
acid00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Acidovorax carolinensis NA2
Class
Metabolism; Carbohydrate metabolism
Pathway map
acid00630  Glyoxylate and dicarboxylate metabolism
acid00630

Module
acid_M00012  Glyoxylate cycle [PATH:acid00630]
acid_M00621  Glycine cleavage system [PATH:acid00630]
Other DBs
GO: 0046487 0043648
Organism
Acidovorax carolinensis NA2 [GN:acid]
Gene
CBP33_11120  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CBP33_07535  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CBP33_08165  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
CBP33_17495  malate synthase G [KO:K01638] [EC:2.3.3.9]
CBP33_06315  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CBP33_06280  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
CBP33_04760  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
CBP33_06330  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CBP33_00115  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_00580  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_15840  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_09635  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_08760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_10715  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP33_09650  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CBP33_00370  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
CBP33_09745  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
CBP33_09740  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CBP33_10220  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
CBP33_09730  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CBP33_01765  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
CBP33_00855  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
CBP33_00865  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
CBP33_13990  catalase HPII [KO:K03781] [EC:1.11.1.6]
CBP33_15730  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
CBP33_08215  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
CBP33_17070  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CBP33_13920  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
CBP33_12705  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
CBP33_12600  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CBP33_10680  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CBP33_10670  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
CBP33_09145  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP33_10085  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP33_10280  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP33_10675  glycine cleavage system protein H [KO:K02437]
CBP33_14115  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
CBP33_04570  glycerate kinase [KO:K11529] [EC:2.7.1.165]
CBP33_10915  glycerate kinase [KO:K11529] [EC:2.7.1.165]
CBP33_08020  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
CBP33_10910  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
CBP33_03295  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CBP33_04290  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
CBP33_04320  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
CBP33_04285  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
CBP33_04325  formate dehydrogenase [KO:K00124]
CBP33_04335  formate dehydrogenase subunit gamma [KO:K00127]
CBP33_04785  arylformamidase [KO:K07130] [EC:3.5.1.9]
CBP33_01775  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
acid00010  Glycolysis / Gluconeogenesis
acid00020  Citrate cycle (TCA cycle)
acid00030  Pentose phosphate pathway
acid00053  Ascorbate and aldarate metabolism
acid00071  Fatty acid degradation
acid00230  Purine metabolism
acid00250  Alanine, aspartate and glutamate metabolism
acid00260  Glycine, serine and threonine metabolism
acid00620  Pyruvate metabolism
acid00710  Carbon fixation by Calvin cycle
acid00750  Vitamin B6 metabolism
acid00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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