KEGG   PATHWAY: acip00630
Entry
acip00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Acidovorax carolinensis P4
Class
Metabolism; Carbohydrate metabolism
Pathway map
acip00630  Glyoxylate and dicarboxylate metabolism
acip00630

Module
acip_M00012  Glyoxylate cycle [PATH:acip00630]
acip_M00621  Glycine cleavage system [PATH:acip00630]
Other DBs
GO: 0046487 0043648
Organism
Acidovorax carolinensis P4 [GN:acip]
Gene
CBP36_11045  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CBP36_08105  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
CBP36_17750  malate synthase G [KO:K01638] [EC:2.3.3.9]
CBP36_06750  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
CBP36_20365  hypothetical protein [KO:K01647] [EC:2.3.3.1]
CBP36_20440  hypothetical protein [KO:K01647] [EC:2.3.3.1]
CBP36_06715  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
CBP36_20900  hypothetical protein [KO:K01647] [EC:2.3.3.1]
CBP36_05185  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
CBP36_06765  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CBP36_00145  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_12460  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_09305  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_11565  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_00630  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_10650  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_16290  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CBP36_09320  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
CBP36_00395  acyl dehydratase [KO:K17865] [EC:4.2.1.55]
CBP36_09415  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
CBP36_09410  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
CBP36_09400  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
CBP36_02155  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
CBP36_00970  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
CBP36_00980  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
CBP36_14495  catalase HPII [KO:K03781] [EC:1.11.1.6]
CBP36_16220  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
CBP36_08645  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
CBP36_17320  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
CBP36_14425  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
CBP36_13180  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
CBP36_13080  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CBP36_10610  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
CBP36_10600  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
CBP36_09805  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP36_08825  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP36_10210  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CBP36_10605  glycine cleavage system protein H [KO:K02437]
CBP36_14625  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
CBP36_04995  glycerate kinase [KO:K11529] [EC:2.7.1.165]
CBP36_10845  glycerate kinase [KO:K11529] [EC:2.7.1.165]
CBP36_08590  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
CBP36_10840  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
CBP36_03715  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
CBP36_04715  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
CBP36_04745  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
CBP36_04710  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
CBP36_04750  formate dehydrogenase [KO:K00124]
CBP36_04760  formate dehydrogenase subunit gamma [KO:K00127]
CBP36_05210  arylformamidase [KO:K07130] [EC:3.5.1.9]
CBP36_02165  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
acip00010  Glycolysis / Gluconeogenesis
acip00020  Citrate cycle (TCA cycle)
acip00030  Pentose phosphate pathway
acip00053  Ascorbate and aldarate metabolism
acip00071  Fatty acid degradation
acip00230  Purine metabolism
acip00250  Alanine, aspartate and glutamate metabolism
acip00260  Glycine, serine and threonine metabolism
acip00620  Pyruvate metabolism
acip00710  Carbon fixation by Calvin cycle
acip00750  Vitamin B6 metabolism
acip00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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