KEGG   PATHWAY: acob00630
Entry
acob00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Candidatus Andeanibacterium colombiense
Class
Metabolism; Carbohydrate metabolism
Pathway map
acob00630  Glyoxylate and dicarboxylate metabolism
acob00630

Module
acob_M00621  Glycine cleavage system [PATH:acob00630]
acob_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:acob00630]
Other DBs
GO: 0046487 0043648
Organism
Candidatus Andeanibacterium colombiense [GN:acob]
Gene
P0Y56_05450  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
P0Y56_06310  malate synthase G [KO:K01638] [EC:2.3.3.9]
P0Y56_14900  malate synthase G [KO:K01638] [EC:2.3.3.9]
P0Y56_03620  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
P0Y56_01285  citrate synthase [KO:K01647] [EC:2.3.3.1]
P0Y56_10055  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
P0Y56_08085  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
P0Y56_01130  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
P0Y56_09730  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
P0Y56_09850  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
P0Y56_06765  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
P0Y56_06775  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
P0Y56_00610  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
P0Y56_06770  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
P0Y56_14880  FAD-linked oxidase C-terminal domain-containing protein [KO:K00104] [EC:1.1.99.14]
P0Y56_14885  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
P0Y56_14890  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
P0Y56_15085  catalase [KO:K03781] [EC:1.11.1.6]
P0Y56_01115  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
P0Y56_16780  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
P0Y56_07445  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
P0Y56_07120  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
P0Y56_02170  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
P0Y56_08670  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
P0Y56_08665  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
P0Y56_08680  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
P0Y56_01610  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P0Y56_03650  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
P0Y56_08675  gcvH; glycine cleavage system protein GcvH [KO:K02437]
P0Y56_15940  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
P0Y56_16055  kinase [KO:K15918] [EC:2.7.1.31]
P0Y56_16600  kinase [KO:K15918] [EC:2.7.1.31]
P0Y56_13580  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
P0Y56_08400  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
P0Y56_08395  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
P0Y56_08385  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein [KO:K00124]
P0Y56_08380  NAD(P)H-dependent oxidoreductase subunit E [KO:K00127]
P0Y56_06250  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
P0Y56_15295  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
acob00010  Glycolysis / Gluconeogenesis
acob00020  Citrate cycle (TCA cycle)
acob00030  Pentose phosphate pathway
acob00053  Ascorbate and aldarate metabolism
acob00071  Fatty acid degradation
acob00230  Purine metabolism
acob00250  Alanine, aspartate and glutamate metabolism
acob00260  Glycine, serine and threonine metabolism
acob00620  Pyruvate metabolism
acob00710  Carbon fixation by Calvin cycle
acob00750  Vitamin B6 metabolism
acob00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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