KEGG   PATHWAY: afv03008
Entry
afv03008                    Pathway                                
Name
Ribosome biogenesis in eukaryotes - Aspergillus flavus
Description
Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.
Class
Genetic Information Processing; Translation
Pathway map
afv03008  Ribosome biogenesis in eukaryotes
afv03008

Organism
Aspergillus flavus [GN:afv]
Gene
AFLA_008916  hypothetical protein [KO:K03115]
AFLA_007328  hypothetical protein [KO:K03115]
AFLA_003477  hypothetical protein [KO:K03097] [EC:2.7.11.1]
AFLA_010631  hypothetical protein [KO:K14544]
AFLA_009082  hypothetical protein [KO:K14545]
AFLA_000511  hypothetical protein [KO:K14546]
AFLA_004346  hypothetical protein [KO:K14548]
AFLA_007813  hypothetical protein [KO:K14549]
AFLA_001227  hypothetical protein [KO:K14550]
AFLA_012844  hypothetical protein [KO:K14553]
AFLA_009120  hypothetical protein [KO:K14554]
AFLA_007170  hypothetical protein [KO:K14555]
AFLA_003641  hypothetical protein [KO:K14556]
AFLA_004092  hypothetical protein [KO:K14557]
AFLA_011938  hypothetical protein [KO:K14558]
AFLA_012891  hypothetical protein [KO:K14559]
AFLA_008267  hypothetical protein [KO:K14560]
AFLA_002302  hypothetical protein [KO:K14561]
AFLA_002152  hypothetical protein [KO:K14563] [EC:2.1.1.-]
AFLA_004112  hypothetical protein [KO:K14564]
AFLA_002509  hypothetical protein [KO:K14565]
AFLA_012846  hypothetical protein [KO:K12845]
AFLA_010679  hypothetical protein [KO:K11131] [EC:5.4.99.-]
AFLA_002241  hypothetical protein [KO:K11129]
AFLA_011153  hypothetical protein [KO:K11128]
AFLA_012036  hypothetical protein [KO:K11130]
AFLA_009801  hypothetical protein [KO:K14566]
AFLA_000750  hypothetical protein [KO:K14567]
AFLA_012086  hypothetical protein [KO:K03685] [EC:3.1.26.3]
AFLA_004723  hypothetical protein [KO:K03685] [EC:3.1.26.3]
AFLA_010583  hypothetical protein [KO:K14568] [EC:2.1.1.260]
AFLA_006038  hypothetical protein [KO:K14569]
AFLA_000855  hypothetical protein [KO:K14521] [EC:2.3.1.-]
AFLA_006667  hypothetical protein [KO:K11108]
AFLA_009329  hypothetical protein [KO:K01164] [EC:3.1.26.5]
AFLA_005558  hypothetical protein [KO:K03538] [EC:3.1.26.5]
AFLA_006568  hypothetical protein [KO:K03537] [EC:3.1.26.5]
AFLA_007923  hypothetical protein [KO:K14526] [EC:3.1.26.5]
AFLA_004700  hypothetical protein [KO:K14528] [EC:3.1.26.5]
AFLA_003476  hypothetical protein [KO:K03539] [EC:3.1.26.5]
AFLA_006592  hypothetical protein [KO:K14531]
AFLA_010939  hypothetical protein [KO:K14530] [EC:3.1.26.5]
AFLA_002126  hypothetical protein [KO:K14570] [EC:3.1.-.-]
AFLA_003551  hypothetical protein [KO:K14570] [EC:3.1.-.-]
AFLA_000940  hypothetical protein [KO:K13288] [EC:3.1.-.-]
AFLA_011941  hypothetical protein [KO:K12618] [EC:3.1.13.-]
AFLA_002225  hypothetical protein [KO:K12619] [EC:3.1.13.-]
AFLA_005784  hypothetical protein [KO:K06943]
AFLA_006986  hypothetical protein [KO:K14537]
AFLA_008851  hypothetical protein [KO:K14538]
AFLA_004442  hypothetical protein [KO:K14571]
AFLA_005852  hypothetical protein [KO:K14572]
AFLA_007322  hypothetical protein [KO:K14573]
AFLA_012035  hypothetical protein [KO:K11883]
AFLA_005694  hypothetical protein [KO:K14758] [EC:2.7.11.1]
AFLA_001236  hypothetical protein [KO:K07936]
AFLA_004485  hypothetical protein [KO:K14290]
AFLA_011597  hypothetical protein [KO:K07562]
AFLA_000879  hypothetical protein [KO:K14284]
AFLA_007134  hypothetical protein [KO:K14285]
AFLA_010712  hypothetical protein [KO:K03264]
AFLA_013195  hypothetical protein [KO:K14574]
AFLA_009708  hypothetical protein [KO:K14536] [EC:3.6.5.-]
AFLA_010776  hypothetical protein [KO:K14539] [EC:3.6.1.-]
AFLA_013020  hypothetical protein [KO:K14575]
AFLA_010665  hypothetical protein [KO:K18532] [EC:2.7.4.3]
AFLA_006169  hypothetical protein [KO:K07178] [EC:2.7.11.1]
AFLA_009508  hypothetical protein [KO:K07179] [EC:2.7.11.1]
Reference
  Authors
Freed EF, Bleichert F, Dutca LM, Baserga SJ
  Title
When ribosomes go bad: diseases of ribosome biogenesis.
  Journal
Mol Biosyst 6:481-93 (2010)
DOI:10.1039/b919670f
Reference
  Authors
Perez-Fernandez J, Roman A, De Las Rivas J, Bustelo XR, Dosil M
  Title
The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.
  Journal
Mol Cell Biol 27:5414-29 (2007)
DOI:10.1128/MCB.00380-07
Reference
  Authors
Strunk BS, Karbstein K
  Title
Powering through ribosome assembly.
  Journal
RNA 15:2083-104 (2009)
DOI:10.1261/rna.1792109
Reference
  Authors
Granneman S, Baserga SJ
  Title
Ribosome biogenesis: of knobs and RNA processing.
  Journal
Exp Cell Res 296:43-50 (2004)
DOI:10.1016/j.yexcr.2004.03.016
Reference
  Authors
Kressler D, Hurt E, Bassler J
  Title
Driving ribosome assembly.
  Journal
Biochim Biophys Acta 1803:673-83 (2010)
DOI:10.1016/j.bbamcr.2009.10.009
Related
pathway
afv03010  Ribosome
KO pathway
ko03008   
LinkDB

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