KEGG   PATHWAY: afw00630
Entry
afw00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Anaeromyxobacter sp. Fw109-5
Class
Metabolism; Carbohydrate metabolism
Pathway map
afw00630  Glyoxylate and dicarboxylate metabolism
afw00630

Module
afw_M00012  Glyoxylate cycle [PATH:afw00630]
afw_M00621  Glycine cleavage system [PATH:afw00630]
Other DBs
GO: 0046487 0043648
Organism
Anaeromyxobacter sp. Fw109-5 [GN:afw]
Gene
Anae109_1587  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Anae109_2586  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Anae109_3461  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Anae109_1767  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Anae109_3170  AMP-dependent synthetase and ligase [KO:K01895] [EC:6.2.1.1]
Anae109_4061  malate synthase [KO:K01638] [EC:2.3.3.9]
Anae109_2963  malate synthase A [KO:K01638] [EC:2.3.3.9]
Anae109_2185  malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
Anae109_1589  malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
Anae109_3798  Citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
Anae109_3793  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
Anae109_1252  aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Anae109_1504  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Anae109_2677  MaoC domain protein dehydratase [KO:K17865] [EC:4.2.1.55]
Anae109_0349  Glyoxalase/bleomycin resistance protein/dioxygenase [KO:K05606] [EC:5.1.99.1]
Anae109_0271  carboxyl transferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Anae109_1989  cobalamin B12-binding domain protein [KO:K01849] [EC:5.4.99.2]
Anae109_1988  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Anae109_0281  methylmalonyl-CoA mutase, large subunit [KO:K01848] [EC:5.4.99.2]
Anae109_2921  D-lactate dehydrogenase (cytochrome) [KO:K00104] [EC:1.1.99.14]
Anae109_1890  FAD linked oxidase domain protein [KO:K00104] [EC:1.1.99.14]
Anae109_2920  FAD linked oxidase domain protein [KO:K11472] [EC:1.1.99.14]
Anae109_2919  protein of unknown function DUF224 cysteine-rich region domain protein [KO:K11473] [EC:1.1.99.14]
Anae109_3162  Catalase [KO:K03781] [EC:1.11.1.6]
Anae109_1983  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding [KO:K00015] [EC:1.1.1.26]
Anae109_1156  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Anae109_0717  Haloacid dehalogenase domain protein hydrolase [KO:K01091] [EC:3.1.3.18]
Anae109_2957  aminotransferase class V [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Anae109_4400  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Anae109_2733  Glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Anae109_2524  Glycine dehydrogenase (decarboxylating) [KO:K00282] [EC:1.4.4.2]
Anae109_2525  Glycine dehydrogenase (decarboxylating) [KO:K00283] [EC:1.4.4.2]
Anae109_2522  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Anae109_1998  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
Anae109_2523  glycine cleavage system H protein [KO:K02437]
Anae109_4278  glycine cleavage H-protein [KO:K02437]
Anae109_1802  glycine cleavage H-protein [KO:K02437]
Anae109_1804  glycine cleavage H-protein [KO:K02437]
Anae109_0452  MOFRL domain protein [KO:K11529] [EC:2.7.1.165]
Anae109_2008  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
Anae109_3043  Formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
Anae109_0862  molydopterin dinucleotide-binding region [KO:K00123] [EC:1.17.1.9]
Anae109_2007  molybdopterin oxidoreductase Fe4S4 region [KO:K00123] [EC:1.17.1.9]
Anae109_3044  molybdopterin oxidoreductase Fe4S4 region [KO:K00123] [EC:1.17.1.9]
Anae109_2009  formate dehydrogenase, beta subunit [KO:K00124]
Anae109_0861  4Fe-4S ferredoxin iron-sulfur binding domain protein [KO:K00124]
Anae109_3042  4Fe-4S ferredoxin iron-sulfur binding domain protein [KO:K00124]
Anae109_1800  4Fe-4S ferredoxin iron-sulfur binding domain protein [KO:K00124]
Anae109_2010  formate dehydrogenase, gamma subunit [KO:K00127]
Anae109_1795  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
afw00010  Glycolysis / Gluconeogenesis
afw00020  Citrate cycle (TCA cycle)
afw00030  Pentose phosphate pathway
afw00053  Ascorbate and aldarate metabolism
afw00071  Fatty acid degradation
afw00230  Purine metabolism
afw00250  Alanine, aspartate and glutamate metabolism
afw00260  Glycine, serine and threonine metabolism
afw00620  Pyruvate metabolism
afw00710  Carbon fixation by Calvin cycle
afw00750  Vitamin B6 metabolism
afw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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