KEGG   PATHWAY: anc00630
Entry
anc00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ancylobacter sp. TS-1
Class
Metabolism; Carbohydrate metabolism
Pathway map
anc00630  Glyoxylate and dicarboxylate metabolism
anc00630

Module
anc_M00012  Glyoxylate cycle [PATH:anc00630]
anc_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:anc00630]
Other DBs
GO: 0046487 0043648
Organism
Ancylobacter sp. TS-1 [GN:anc]
Gene
GBB76_00950  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
GBB76_08580  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
GBB76_00945  malate synthase G [KO:K01638] [EC:2.3.3.9]
GBB76_10575  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
GBB76_04730  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
GBB76_11525  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
GBB76_08260  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
GBB76_17860  thiolase family protein [KO:K00626] [EC:2.3.1.9]
GBB76_08255  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
GBB76_04830  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
GBB76_17665  acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01965] [EC:6.4.1.3]
GBB76_17670  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
GBB76_17650  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
GBB76_17660  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
GBB76_13285  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
GBB76_13295  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
GBB76_13300  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
GBB76_12475  catalase [KO:K03781] [EC:1.11.1.6]
GBB76_16045  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
GBB76_10215  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
GBB76_16245  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
GBB76_01245  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
GBB76_05955  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
GBB76_17555  ribulose-bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
GBB76_17560  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
GBB76_07360  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
GBB76_01425  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
GBB76_06005  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
GBB76_17495  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
GBB76_16590  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
GBB76_16035  glycine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
GBB76_03705  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
GBB76_17525  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
GBB76_10595  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GBB76_04580  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
GBB76_08880  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
GBB76_08885  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
GBB76_08890  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
GBB76_09455  DUF4147 domain-containing protein [KO:K11529] [EC:2.7.1.165]
GBB76_15785  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
GBB76_00980  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
GBB76_08955  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
GBB76_17400  cupin domain-containing protein [KO:K01569] [EC:4.1.1.2]
GBB76_10430  NAD-dependent formate dehydrogenase [KO:K00122] [EC:1.17.1.9]
GBB76_13035  hypothetical protein [KO:K00126] [EC:1.17.1.9]
GBB76_13025  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
GBB76_11590  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
GBB76_11595  fdxH; formate dehydrogenase subunit beta [KO:K00124]
GBB76_13020  formate dehydrogenase [KO:K00124]
GBB76_11600  formate dehydrogenase subunit gamma [KO:K00127]
GBB76_13015  formate dehydrogenase subunit gamma [KO:K00127]
GBB76_17725  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
GBB76_06880  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
GBB76_08855  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
GBB76_08870  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
GBB76_08860  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
anc00010  Glycolysis / Gluconeogenesis
anc00020  Citrate cycle (TCA cycle)
anc00030  Pentose phosphate pathway
anc00053  Ascorbate and aldarate metabolism
anc00071  Fatty acid degradation
anc00230  Purine metabolism
anc00250  Alanine, aspartate and glutamate metabolism
anc00260  Glycine, serine and threonine metabolism
anc00620  Pyruvate metabolism
anc00710  Carbon fixation by Calvin cycle
anc00750  Vitamin B6 metabolism
anc00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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