KEGG   PATHWAY: aoz00630
Entry
aoz00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum oryzae
Class
Metabolism; Carbohydrate metabolism
Pathway map
aoz00630  Glyoxylate and dicarboxylate metabolism
aoz00630

Module
aoz_M00012  Glyoxylate cycle [PATH:aoz00630]
aoz_M00621  Glycine cleavage system [PATH:aoz00630]
aoz_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:aoz00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum oryzae [GN:aoz]
Gene
HUE56_04100  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HUE56_25610  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUE56_26935  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUE56_29005  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HUE56_12485  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HUE56_21845  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
HUE56_03455  malate synthase G [KO:K01638] [EC:2.3.3.9]
HUE56_11840  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HUE56_18175  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HUE56_22405  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HUE56_07745  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
HUE56_12445  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HUE56_03590  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
HUE56_26860  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HUE56_28340  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
HUE56_02380  thiolase family protein [KO:K00626] [EC:2.3.1.9]
HUE56_03245  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HUE56_08355  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HUE56_13075  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HUE56_13080  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HUE56_20650  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
HUE56_26220  MaoC family dehydratase N-terminal domain-containing protein [KO:K17865] [EC:4.2.1.55]
HUE56_13985  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
HUE56_01910  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
HUE56_01905  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
HUE56_01915  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HUE56_21285  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HUE56_21280  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HUE56_21275  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HUE56_01415  catalase [KO:K03781] [EC:1.11.1.6]
HUE56_11340  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
HUE56_02255  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HUE56_09035  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HUE56_26065  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HUE56_03175  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HUE56_17035  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
HUE56_27140  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
HUE56_14045  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
HUE56_16805  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
HUE56_03820  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HUE56_14855  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HUE56_19165  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HUE56_16590  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
HUE56_16595  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
HUE56_16580  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HUE56_12080  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUE56_16970  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HUE56_16585  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HUE56_27280  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
HUE56_07065  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
HUE56_27200  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
HUE56_07060  glxR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
HUE56_07055  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HUE56_02240  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HUE56_22445  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HUE56_26695  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
HUE56_20095  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HUE56_26705  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HUE56_05165  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HUE56_20090  4Fe-4S dicluster domain-containing protein [KO:K00124]
HUE56_26710  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
HUE56_05160  4Fe-4S dicluster domain-containing protein [KO:K00124]
HUE56_20080  formate dehydrogenase subunit gamma [KO:K00127]
HUE56_26715  formate dehydrogenase subunit gamma [KO:K00127]
HUE56_05155  formate dehydrogenase subunit gamma [KO:K00127]
HUE56_28535  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
HUE56_27365  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HUE56_07690  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
HUE56_17945  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
HUE56_01480  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
HUE56_27310  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
aoz00010  Glycolysis / Gluconeogenesis
aoz00020  Citrate cycle (TCA cycle)
aoz00030  Pentose phosphate pathway
aoz00053  Ascorbate and aldarate metabolism
aoz00071  Fatty acid degradation
aoz00230  Purine metabolism
aoz00250  Alanine, aspartate and glutamate metabolism
aoz00260  Glycine, serine and threonine metabolism
aoz00620  Pyruvate metabolism
aoz00710  Carbon fixation by Calvin cycle
aoz00750  Vitamin B6 metabolism
aoz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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