KEGG   PATHWAY: apau00630
Entry
apau00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Anaeromyxobacter paludicola
Class
Metabolism; Carbohydrate metabolism
Pathway map
apau00630  Glyoxylate and dicarboxylate metabolism
apau00630

Module
apau_M00012  Glyoxylate cycle [PATH:apau00630]
apau_M00621  Glycine cleavage system [PATH:apau00630]
Other DBs
GO: 0046487 0043648
Organism
Anaeromyxobacter paludicola [GN:apau]
Gene
AMPC_32180  aceA; isocitrate lyase 2 [KO:K01637] [EC:4.1.3.1]
AMPC_04610  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
AMPC_31390  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
AMPC_36940  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AMPC_19430  malate synthase [KO:K01638] [EC:2.3.3.9]
AMPC_04200  mdh_1; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AMPC_08450  mdh_2; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AMPC_35100  gltA; type I citrate synthase [KO:K01647] [EC:2.3.3.1]
AMPC_35130  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AMPC_00870  acnB; aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AMPC_03680  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AMPC_25230  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
AMPC_26010  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
AMPC_06900  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
AMPC_06890  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
AMPC_25920  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
AMPC_05740  glcD-1; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
AMPC_18410  glcD; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
AMPC_18430  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
AMPC_14180  phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
AMPC_18700  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AMPC_29620  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AMPC_00370  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AMPC_12270  gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 [KO:K00282] [EC:1.4.4.2]
AMPC_12280  glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
AMPC_12250  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AMPC_08190  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
AMPC_12260  gcvH; glycine cleavage system protein GcvH [KO:K02437]
AMPC_13440  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AMPC_31140  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AMPC_04520  fdoG_1; formate dehydrogenase-O, alpha subunit, selenocysteine-containing [KO:K00123] [EC:1.17.1.9]
AMPC_16220  formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
AMPC_36570  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
AMPC_38340  fdoG_2; formate dehydrogenase-O, alpha subunit, selenocysteine-containing [KO:K00123] [EC:1.17.1.9]
AMPC_36560  ferredoxin [KO:K00124]
AMPC_38330  fdnH; nitrate-inducible formate dehydrogenase subunit beta [KO:K00124]
AMPC_38320  fdoI; formate dehydrogenase cytochrome b556 subunit [KO:K00127]
AMPC_04830  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
apau00010  Glycolysis / Gluconeogenesis
apau00020  Citrate cycle (TCA cycle)
apau00030  Pentose phosphate pathway
apau00053  Ascorbate and aldarate metabolism
apau00071  Fatty acid degradation
apau00230  Purine metabolism
apau00250  Alanine, aspartate and glutamate metabolism
apau00260  Glycine, serine and threonine metabolism
apau00620  Pyruvate metabolism
apau00710  Carbon fixation by Calvin cycle
apau00750  Vitamin B6 metabolism
apau00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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