KEGG   PATHWAY: atf00061
Entry
atf00061                    Pathway                                
Name
Fatty acid biosynthesis - Agrobacterium tumefaciens Ach5
Class
Metabolism; Lipid metabolism
Pathway map
atf00061  Fatty acid biosynthesis
atf00061

Module
atf_M00082  Fatty acid biosynthesis, initiation [PATH:atf00061]
atf_M00083  Fatty acid biosynthesis, elongation [PATH:atf00061]
atf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:atf00061]
Other DBs
GO: 0006633
Organism
Agrobacterium tumefaciens Ach5 [GN:atf]
Gene
Ach5_34780  accA; acetyl-CoA carboxylase, carboxyltransferase alpha subunit [KO:K01962] [EC:6.4.1.2 2.1.3.15]
Ach5_12290  accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein [KO:K02160]
Ach5_37150  accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein [KO:K02160]
Ach5_12280  accC; acetyl-CoA carboxylase, biotin carboxylase [KO:K01961] [EC:6.4.1.2 6.3.4.14]
Ach5_37160  accC; acetyl-CoA carboxylase, biotin carboxylase subunit [KO:K01961] [EC:6.4.1.2 6.3.4.14]
Ach5_00200  accD; acetyl-CoA carboxylase, beta subunit [KO:K01963] [EC:6.4.1.2 2.1.3.15]
Ach5_36930  biotin carboxylase [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Ach5_10120  fabD; [acyl-carrier-protein] S-malonyltransferase [KO:K00645] [EC:2.3.1.39]
Ach5_37870  fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [KO:K00648] [EC:2.3.1.180]
Ach5_10930  fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [KO:K00648] [EC:2.3.1.180]
Ach5_01350  fabB; 3-oxoacyl-[acyl-carrier-protein] synthase II [KO:K00647] [EC:2.3.1.41]
Ach5_10150  fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [KO:K09458] [EC:2.3.1.179]
Ach5_15290  fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [KO:K09458] [EC:2.3.1.179]
Ach5_15300  fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [KO:K09458] [EC:2.3.1.179]
Ach5_39530  fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [KO:K09458] [EC:2.3.1.179]
Ach5_49830  hypothetical protein [KO:K00059] [EC:1.1.1.100]
Ach5_40480  fabG; 3-oxoacyl-[acyl-carrier protein] reductase [KO:K00059] [EC:1.1.1.100]
Ach5_10130  fabG; 3-oxoacyl-[acyl-carrier protein] reductase [KO:K00059] [EC:1.1.1.100]
Ach5_09140  NAD/NADP dependent oxidoreductase [KO:K00059] [EC:1.1.1.100]
Ach5_28150  short chain dehydrogenase [KO:K00059] [EC:1.1.1.100]
Ach5_51800  fabG; 3-oxoacyl-[acyl-carrier protein] reductase [KO:K00059] [EC:1.1.1.100]
Ach5_27840  fabG; 3-oxoacyl-[acyl-carrier protein] reductase [KO:K00059] [EC:1.1.1.100]
Ach5_01360  fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase [KO:K01716] [EC:4.2.1.59 5.3.3.14]
Ach5_12840  fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [KO:K02372] [EC:4.2.1.59]
Ach5_15310  fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [KO:K02372] [EC:4.2.1.59]
Ach5_01340  fabI; enoyl-[acyl-carrier protein] reductase I [KO:K00208] [EC:1.3.1.9 1.3.1.10]
Ach5_06760  fabI; enoyl-[acyl-carrier protein] reductase I [KO:K00208] [EC:1.3.1.9 1.3.1.10]
Ach5_03780  fadD; long-chain acyl-CoA synthetase [KO:K01897] [EC:6.2.1.3]
Ach5_40340  AMP-dependent synthetase [KO:K01897] [EC:6.2.1.3]
Compound
C00024  Acetyl-CoA
C00083  Malonyl-CoA
C00154  Palmitoyl-CoA
C00173  Acyl-[acyl-carrier protein]
C00229  Acyl-carrier protein
C00249  Hexadecanoic acid
C00383  Malonate
C00638  Long-chain fatty acid
C00685  3-Oxoacyl-[acyl-carrier protein]
C00693  trans-2,3-Dehydroacyl-[acyl-carrier protein]
C00712  (9Z)-Octadecenoic acid
C01203  Oleoyl-[acyl-carrier protein]
C01209  Malonyl-[acyl-carrier protein]
C01271  (3R)-3-Hydroxyacyl-[acyl-carrier protein]
C01530  Octadecanoic acid
C01571  Decanoic acid
C02679  Dodecanoic acid
C02843  Long-chain acyl-CoA
C03939  Acetyl-[acyl-carrier protein]
C04088  Octadecanoyl-[acyl-carrier protein]
C04180  cis-Dec-3-enoyl-[acp]
C04246  But-2-enoyl-[acyl-carrier protein]
C04618  (3R)-3-Hydroxybutanoyl-[acyl-carrier protein]
C04619  (3R)-3-Hydroxydecanoyl-[acyl-carrier protein]
C04620  (3R)-3-Hydroxyoctanoyl-[acyl-carrier protein]
C04633  (3R)-3-Hydroxypalmitoyl-[acyl-carrier protein]
C04688  (3R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]
C05223  Dodecanoyl-[acyl-carrier protein]
C05744  Acetoacetyl-[acp]
C05745  Butyryl-[acp]
C05746  3-Oxohexanoyl-[acp]
C05747  (3R)-3-Hydroxyhexanoyl-[acyl-carrier protein]
C05748  trans-Hex-2-enoyl-[acp]
C05749  Hexanoyl-[acp]
C05750  3-Oxooctanoyl-[acp]
C05751  trans-Oct-2-enoyl-[acp]
C05752  Octanoyl-[acp]
C05753  3-Oxodecanoyl-[acp]
C05754  trans-Dec-2-enoyl-[acp]
C05755  Decanoyl-[acp]
C05756  3-Oxododecanoyl-[acp]
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05758  trans-Dodec-2-enoyl-[acp]
C05759  3-Oxotetradecanoyl-[acp]
C05760  trans-Tetradec-2-enoyl-[acp]
C05761  Tetradecanoyl-[acp]
C05762  3-Oxohexadecanoyl-[acp]
C05763  trans-Hexadec-2-enoyl-[acp]
C05764  Hexadecanoyl-[acp]
C06423  Octanoic acid
C06424  Tetradecanoic acid
C08362  (9Z)-Hexadecenoic acid
C16219  3-Oxostearoyl-[acp]
C16220  (3R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]
C16221  (2E)-Octadecenoyl-[acp]
C16520  Hexadecenoyl-[acyl-carrier protein]
C20683  Long-chain acyl-[acyl-carrier protein]
C20794  n-7 Unsaturated acyl-[acyl-carrier protein]
Reference
  Authors
Salas JJ, Ohlrogge JB.
  Title
Characterization of substrate specificity of plant FatA and FatB acyl-ACP thioesterases.
  Journal
Arch Biochem Biophys 403:25-34 (2002)
DOI:10.1016/S0003-9861(02)00017-6
Reference
  Authors
Zhang YM, Marrakchi H, White SW, Rock CO.
  Title
The application of computational methods to explore the diversity and structure of bacterial fatty acid synthase.
  Journal
J Lipid Res 44:1-10 (2003)
DOI:10.1194/jlr.R200016-JLR200
Reference
  Authors
Voelker T, Kinney AJ.
  Title
VARIATIONS IN THE BIOSYNTHESIS OF SEED-STORAGE LIPIDS.
  Journal
Annu Rev Plant Physiol Plant Mol Biol 52:335-361 (2001)
DOI:10.1146/annurev.arplant.52.1.335
Reference
  Authors
Barker GC, Larson TR, Graham IA, Lynn JR, King GJ.
  Title
Novel insights into seed fatty acid synthesis and modification pathways from genetic diversity and quantitative trait Loci analysis of the Brassica C genome.
  Journal
Plant Physiol 144:1827-42 (2007)
DOI:10.1104/pp.107.096172
Reference
  Authors
Bowman CE, Wolfgang MJ
  Title
Role of the malonyl-CoA synthetase ACSF3 in mitochondrial metabolism.
  Journal
Adv Biol Regul 71:34-40 (2019)
DOI:10.1016/j.jbior.2018.09.002
Reference
  Authors
Venkatesan R, Sah-Teli SK, Awoniyi LO, Jiang G, Prus P, Kastaniotis AJ, Hiltunen JK, Wierenga RK, Chen Z
  Title
Insights into mitochondrial fatty acid synthesis from the structure of heterotetrameric 3-ketoacyl-ACP reductase/3R-hydroxyacyl-CoA dehydrogenase.
  Journal
Nat Commun 5:4805 (2014)
DOI:10.1038/ncomms5805
Reference
  Authors
Hiltunen JK, Chen Z, Haapalainen AM, Wierenga RK, Kastaniotis AJ
  Title
Mitochondrial fatty acid synthesis--an adopted set of enzymes making a pathway of major importance for the cellular metabolism.
  Journal
Prog Lipid Res 49:27-45 (2010)
DOI:10.1016/j.plipres.2009.08.001
Reference
  Authors
Kastaniotis AJ, Autio KJ, Keratar JM, Monteuuis G, Makela AM, Nair RR, Pietikainen LP, Shvetsova A, Chen Z, Hiltunen JK
  Title
Mitochondrial fatty acid synthesis, fatty acids and mitochondrial physiology.
  Journal
Biochim Biophys Acta Mol Cell Biol Lipids 1862:39-48 (2017)
DOI:10.1016/j.bbalip.2016.08.011
Related
pathway
atf00020  Citrate cycle (TCA cycle)
atf00071  Fatty acid degradation
atf00410  beta-Alanine metabolism
atf00561  Glycerolipid metabolism
atf00564  Glycerophospholipid metabolism
atf00620  Pyruvate metabolism
atf00785  Lipoic acid metabolism
KO pathway
ko00061   
LinkDB

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