KEGG   PATHWAY: ats00630
Entry
ats00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aegilops tauschii (wheat D)
Class
Metabolism; Carbohydrate metabolism
Pathway map
ats00630  Glyoxylate and dicarboxylate metabolism
ats00630

Module
ats_M00012  Glyoxylate cycle [PATH:ats00630]
ats_M00621  Glycine cleavage system [PATH:ats00630]
Other DBs
GO: 0046487 0043648
Organism
Aegilops tauschii (wheat D) [GN:ats]
Gene
109731718  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
109740012  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
109755350  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
109737766  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
109767198  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
109737755  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
109768280  malate synthase [KO:K01638] [EC:2.3.3.9]
109742567  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
109749008  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
109751657  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
109782175  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
109784558  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
109772367  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
109759790  malate dehydrogenase 1, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
109742699  citrate synthase 4, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
109773224  citrate synthase 3, peroxisomal-like [KO:K01647] [EC:2.3.3.1]
109738732  putative aconitate hydratase, cytoplasmic isoform X1 [KO:K01681] [EC:4.2.1.3]
109761903  putative aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
109735417  putative aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
109764785  putative aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
109780467  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
109748562  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
109773894  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
109744615  peroxisomal (S)-2-hydroxy-acid oxidase GLO4 [KO:K11517] [EC:1.1.3.15]
109770439  peroxisomal (S)-2-hydroxy-acid oxidase GLO5 [KO:K11517] [EC:1.1.3.15]
109773709  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
109732559  peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
109734314  peroxisomal (S)-2-hydroxy-acid oxidase GLO3 [KO:K11517] [EC:1.1.3.15]
109735378  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
109751763  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
109750340  catalase-1 [KO:K03781] [EC:1.11.1.6]
109751459  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
109746663  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
109746609  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
109746729  hydroxyphenylpyruvate reductase-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
109780462  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
109737508  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
109750521  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
109767931  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
109734281  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
109782319  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
109756851  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
109754280  ribulose bisphosphate carboxylase small chain PW9, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
109754281  ribulose bisphosphate carboxylase small chain PW9, chloroplastic [KO:K01602] [EC:4.1.1.39]
109754299  ribulose bisphosphate carboxylase small chain PW9, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
109754300  ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
109754312  ribulose bisphosphate carboxylase small chain PW9, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
109763713  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
109747472  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
109734653  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
109733233  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
109764334  glutamine synthetase cytosolic isozyme 1-3 [KO:K01915] [EC:6.3.1.2]
109750078  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
109755589  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
109778407  glutamine synthetase cytosolic isozyme 1-2 [KO:K01915] [EC:6.3.1.2]
109760414  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
109786470  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
109770763  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
109766710  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
109783847  glycine dehydrogenase (decarboxylating) 1, mitochondrial-like [KO:K00281] [EC:1.4.4.2]
109734312  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
109770946  leghemoglobin reductase-like [KO:K00382] [EC:1.8.1.4]
109767106  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
109767658  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
109748285  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
109773349  glycine cleavage system H protein, mitochondrial [KO:K02437]
109784955  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
109765627  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
109774317  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
109761220  formate dehydrogenase 2, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
109771762  formyltetrahydrofolate deformylase 2, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
109753725  uncharacterized protein LOC109753725 [KO:K01455] [EC:3.5.1.49]
109774857  uncharacterized protein LOC109774857 [KO:K01455] [EC:3.5.1.49]
109757900  oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
ats00010  Glycolysis / Gluconeogenesis
ats00020  Citrate cycle (TCA cycle)
ats00030  Pentose phosphate pathway
ats00053  Ascorbate and aldarate metabolism
ats00071  Fatty acid degradation
ats00230  Purine metabolism
ats00250  Alanine, aspartate and glutamate metabolism
ats00260  Glycine, serine and threonine metabolism
ats00620  Pyruvate metabolism
ats00710  Carbon fixation by Calvin cycle
ats00750  Vitamin B6 metabolism
ats00910  Nitrogen metabolism
KO pathway
ko00630   
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