KEGG   PATHWAY: auz00630
Entry
auz00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Aureimonas sp. SA4125
Class
Metabolism; Carbohydrate metabolism
Pathway map
auz00630  Glyoxylate and dicarboxylate metabolism
auz00630

Module
auz_M00012  Glyoxylate cycle [PATH:auz00630]
auz_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:auz00630]
Other DBs
GO: 0046487 0043648
Organism
Aureimonas sp. SA4125 [GN:auz]
Gene
Sa4125_10810  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
Sa4125_43800  acsA; acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
Sa4125_45130  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
Sa4125_43520  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Sa4125_22350  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
Sa4125_42100  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
Sa4125_07320  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Sa4125_37760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Sa4125_40380  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
Sa4125_37750  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
Sa4125_20040  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
Sa4125_23030  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
Sa4125_23090  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
Sa4125_47170  acetyl/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
Sa4125_35450  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Sa4125_35460  mutA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
Sa4125_03320  lactate dehydrogenase [KO:K00104] [EC:1.1.99.14]
Sa4125_03300  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
Sa4125_03270  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Sa4125_05740  katA; catalase A [KO:K03781] [EC:1.11.1.6]
Sa4125_46420  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
Sa4125_02020  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
Sa4125_15640  gph1; phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
Sa4125_23110  hydrolase [KO:K01091] [EC:3.1.3.18]
Sa4125_32200  phosphatase [KO:K01091] [EC:3.1.3.18]
Sa4125_04110  cbbL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
Sa4125_04120  cbbS; ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
Sa4125_39810  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Sa4125_03240  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Sa4125_10760  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Sa4125_11510  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Sa4125_22430  glnA3; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Sa4125_16000  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Sa4125_10140  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Sa4125_10160  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
Sa4125_22150  lpdA1; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Sa4125_43410  lpdA2; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Sa4125_03960  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Sa4125_08790  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Sa4125_08800  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
Sa4125_36090  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Sa4125_08320  fdsD; formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
Sa4125_08300  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
Sa4125_16830  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
Sa4125_08270  formate dehydrogenase subunit beta [KO:K00124]
Sa4125_16840  formate dehydrogenase [KO:K00124]
Sa4125_08260  formate dehydrogenase subunit gamma [KO:K00127]
Sa4125_16850  formate dehydrogenase subunit gamma [KO:K00127]
Sa4125_14510  purU1; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Sa4125_17340  amiF; formamidase [KO:K01455] [EC:3.5.1.49]
Sa4125_26720  amidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
auz00010  Glycolysis / Gluconeogenesis
auz00020  Citrate cycle (TCA cycle)
auz00030  Pentose phosphate pathway
auz00053  Ascorbate and aldarate metabolism
auz00071  Fatty acid degradation
auz00230  Purine metabolism
auz00250  Alanine, aspartate and glutamate metabolism
auz00260  Glycine, serine and threonine metabolism
auz00620  Pyruvate metabolism
auz00710  Carbon fixation by Calvin cycle
auz00750  Vitamin B6 metabolism
auz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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