KEGG   PATHWAY: axo00630
Entry
axo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Achromobacter xylosoxidans NH44784-1996
Class
Metabolism; Carbohydrate metabolism
Pathway map
axo00630  Glyoxylate and dicarboxylate metabolism
axo00630

Module
axo_M00012  Glyoxylate cycle [PATH:axo00630]
axo_M00621  Glycine cleavage system [PATH:axo00630]
Other DBs
GO: 0046487 0043648
Organism
Achromobacter xylosoxidans NH44784-1996 [GN:axo]
Gene
NH44784_063551  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
NH44784_004631  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
NH44784_004931  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
NH44784_040191  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
NH44784_023451  Malate synthase G [KO:K01638] [EC:2.3.3.9]
NH44784_004521  Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
NH44784_004451  Citrate synthase (si [KO:K01647] [EC:2.3.3.1]
NH44784_026421  Citrate synthase (si [KO:K01647] [EC:2.3.3.1]
NH44784_028351  Citrate synthase (si [KO:K01647] [EC:2.3.3.1]
NH44784_051101  Citrate synthase (si [KO:K01647] [EC:2.3.3.1]
NH44784_060381  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
NH44784_032441  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
NH44784_036531  Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
NH44784_058141  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_058211  Acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
NH44784_063941  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_061091  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_020831  Acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
NH44784_041231  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_051741  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_020931  thiolase [KO:K00626] [EC:2.3.1.9]
NH44784_006591  Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
NH44784_004141  Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
NH44784_028891  Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
NH44784_001881  Glycolate dehydrogenase [KO:K00104] [EC:1.1.99.14]
NH44784_001871  Glycolate dehydrogenase [KO:K11472] [EC:1.1.99.14]
NH44784_001861  Glycolate dehydrogenase [KO:K11473] [EC:1.1.99.14]
NH44784_059141  Catalase [KO:K03781] [EC:1.11.1.6]
NH44784_022111  Catalase [KO:K03781] [EC:1.11.1.6]
NH44784_013731  D-3-phosphoglycerate dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NH44784_021771  D-3-phosphoglycerate dehydrogenase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
NH44784_018241  Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
NH44784_005391  Similar to phosphoglycolate phosphatase,clustered with ribosomal large subunit pseudouridine synthase C [KO:K01091] [EC:3.1.3.18]
NH44784_025591  probable haloacid dehalogenase-like hydrolase [KO:K01091] [EC:3.1.3.18]
NH44784_022481  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
NH44784_015011  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
NH44784_029281  Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein [KO:K00281] [EC:1.4.4.2]
NH44784_029261  Aminomethyltransferase (glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
NH44784_004311  Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH44784_041831  Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH44784_042391  Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
NH44784_027011  Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex [KO:K00382] [EC:1.8.1.4]
NH44784_044821  Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
NH44784_029271  Glycine cleavage system H protein [KO:K02437]
NH44784_012731  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
NH44784_063591  Tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NH44784_036951  Tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
NH44784_011841  4-Hydroxy-2-oxoglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
NH44784_033661  NAD-dependent formate dehydrogenase delta subunit [KO:K00126] [EC:1.17.1.9]
NH44784_018461  Formate dehydrogenase O alpha subunit [KO:K00123] [EC:1.17.1.9]
NH44784_033681  NAD-dependent formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
NH44784_018451  Formate dehydrogenase O beta subunit [KO:K00124]
NH44784_033691  NAD-dependent formate dehydrogenase beta subunit [KO:K00124]
NH44784_018441  Formate dehydrogenase O gamma subunit [KO:K00127]
NH44784_033701  NAD-dependent formate dehydrogenase gamma subunit [KO:K00127]
NH44784_017271  putative esterase [KO:K01432] [EC:3.5.1.9]
NH44784_059091  esterase/lipase/thioesterase family protein [KO:K01432] [EC:3.5.1.9]
NH44784_003151  Kynurenine formamidase, bacterial [KO:K07130] [EC:3.5.1.9]
NH44784_012081  Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
NH44784_057351  Formamidase [KO:K01455] [EC:3.5.1.49]
NH44784_041351  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
axo00010  Glycolysis / Gluconeogenesis
axo00020  Citrate cycle (TCA cycle)
axo00030  Pentose phosphate pathway
axo00053  Ascorbate and aldarate metabolism
axo00071  Fatty acid degradation
axo00230  Purine metabolism
axo00250  Alanine, aspartate and glutamate metabolism
axo00260  Glycine, serine and threonine metabolism
axo00620  Pyruvate metabolism
axo00710  Carbon fixation by Calvin cycle
axo00750  Vitamin B6 metabolism
axo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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