KEGG   PATHWAY: azs00630
Entry
azs00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Azospirillum sp. TSH100
Class
Metabolism; Carbohydrate metabolism
Pathway map
azs00630  Glyoxylate and dicarboxylate metabolism
azs00630

Module
azs_M00012  Glyoxylate cycle [PATH:azs00630]
azs_M00621  Glycine cleavage system [PATH:azs00630]
azs_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:azs00630]
Other DBs
GO: 0046487 0043648
Organism
Azospirillum sp. TSH100 [GN:azs]
Gene
E6C72_26205  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
E6C72_14240  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
E6C72_17735  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
E6C72_02150  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
E6C72_02670  aceB; malate synthase A [KO:K01638] [EC:2.3.3.9]
E6C72_20005  malate synthase G [KO:K01638] [EC:2.3.3.9]
E6C72_05810  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
E6C72_11230  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
E6C72_29760  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
E6C72_02185  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
E6C72_19895  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
E6C72_14300  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
E6C72_18430  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E6C72_18655  thiolase family protein [KO:K00626] [EC:2.3.1.9]
E6C72_21395  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
E6C72_01520  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E6C72_01515  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
E6C72_07095  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
E6C72_00605  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
E6C72_18995  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
E6C72_19000  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
E6C72_18990  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
E6C72_06425  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
E6C72_06430  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
E6C72_06435  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
E6C72_19420  catalase [KO:K03781] [EC:1.11.1.6]
E6C72_03505  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
E6C72_05665  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E6C72_22840  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E6C72_10685  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
E6C72_10905  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
E6C72_16490  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
E6C72_00545  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
E6C72_12585  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
E6C72_19650  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
E6C72_08545  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
E6C72_18090  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
E6C72_11110  aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
E6C72_11105  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
E6C72_11120  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
E6C72_10760  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E6C72_02520  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E6C72_11115  gcvH; glycine cleavage system protein GcvH [KO:K02437]
E6C72_16630  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
E6C72_28015  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
E6C72_16550  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
E6C72_28020  glxR; 2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
E6C72_28025  glycerate kinase [KO:K11529] [EC:2.7.1.165]
E6C72_17965  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
E6C72_18005  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
E6C72_22825  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
E6C72_29710  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
E6C72_15330  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
E6C72_07650  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
E6C72_15340  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
E6C72_22345  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
E6C72_27280  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
E6C72_22340  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
E6C72_07655  4Fe-4S dicluster domain-containing protein [KO:K00124]
E6C72_15345  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
E6C72_27275  4Fe-4S dicluster domain-containing protein [KO:K00124]
E6C72_07665  formate dehydrogenase subunit gamma [KO:K00127]
E6C72_15350  formate dehydrogenase subunit gamma [KO:K00127]
E6C72_27270  formate dehydrogenase subunit gamma [KO:K00127]
E6C72_16700  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
E6C72_18125  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
E6C72_09800  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
E6C72_19370  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
E6C72_16650  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
azs00010  Glycolysis / Gluconeogenesis
azs00020  Citrate cycle (TCA cycle)
azs00030  Pentose phosphate pathway
azs00053  Ascorbate and aldarate metabolism
azs00071  Fatty acid degradation
azs00230  Purine metabolism
azs00250  Alanine, aspartate and glutamate metabolism
azs00260  Glycine, serine and threonine metabolism
azs00620  Pyruvate metabolism
azs00710  Carbon fixation by Calvin cycle
azs00750  Vitamin B6 metabolism
azs00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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