KEGG   PATHWAY: bbb03440
Entry
bbb03440                    Pathway                                
Name
Homologous recombination - Bifidobacterium animalis subsp. lactis BB-12
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
bbb03440  Homologous recombination
bbb03440

Other DBs
GO: 0000724
Organism
Bifidobacterium animalis subsp. lactis BB-12 [GN:bbb]
Gene
BIF_00472  single-stranded DNA-binding protein [KO:K03111]
BIF_01053  single-stranded DNA-binding protein [KO:K03111]
BIF_01454  recF; DNA replication and repair protein RecF [KO:K03629]
BIF_00372  recO; DNA repair protein RecO [KO:K03584]
BIF_01499  recR; recombination protein RecR [KO:K06187]
BIF_00053  recA; recombinase RecA [KO:K03553]
BIF_00563  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
BIF_00229  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
BIF_00562  ruvC; crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
BIF_00398  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
BIF_01689  winged helix-turn-helix transcriptional regulator [KO:K03655] [EC:5.6.2.4]
BIF_00801  dnaE; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
BIF_01452  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
BIF_01500  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
BIF_00697  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
BIF_00203  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
BIF_02011  3'-5' exonuclease [KO:K02342] [EC:2.7.7.7]
BIF_01283  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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