KEGG   PATHWAY: bgu00630
Entry
bgu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia glumae LMG 2196 = ATCC 33617
Class
Metabolism; Carbohydrate metabolism
Pathway map
bgu00630  Glyoxylate and dicarboxylate metabolism
bgu00630

Module
bgu_M00012  Glyoxylate cycle [PATH:bgu00630]
bgu_M00621  Glycine cleavage system [PATH:bgu00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia glumae LMG 2196 = ATCC 33617 [GN:bgu]
Gene
KS03_2207  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KS03_2153  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
KS03_3307  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KS03_5290  AMP-binding enzyme family protein [KO:K01895] [EC:6.2.1.1]
KS03_5164  glcB; malate synthase G [KO:K01638] [EC:2.3.3.9]
KS03_5095  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KS03_5088  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
KS03_5099  acnA; aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
KS03_3991  aconitase family protein [KO:K01681] [EC:4.2.1.3]
KS03_4466  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
KS03_698  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
KS03_2489  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
KS03_2339  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
KS03_2440  acetyl-CoA C-acyltransferase family protein [KO:K00626] [EC:2.3.1.9]
KS03_2441  phbB-1; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
KS03_3893  phbB; acetoacetyl-CoA reductase family protein [KO:K00023] [EC:1.1.1.36]
KS03_5773  hypothetical protein [KO:K01847] [EC:5.4.99.2]
KS03_1548  FAD binding domain protein [KO:K00104] [EC:1.1.99.14]
KS03_1547  FAD binding domain protein [KO:K11472] [EC:1.1.99.14]
KS03_1546  4Fe-4S binding domain protein [KO:K11473] [EC:1.1.99.14]
KS03_926  catalase family protein [KO:K03781] [EC:1.11.1.6]
KS03_3096  catalase family protein [KO:K03781] [EC:1.11.1.6]
KS03_3963  catalase family protein [KO:K03781] [EC:1.11.1.6]
KS03_718  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
KS03_4888  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [KO:K12972] [EC:1.1.1.79 1.1.1.81]
KS03_2521  ghrB; glyoxylate/hydroxypyruvate reductase B [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
KS03_1867  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
KS03_1366  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
KS03_4832  HAD hydrolase, IA, variant 1 family protein [KO:K01091] [EC:3.1.3.18]
KS03_1876  HAD hydrolase, IA, variant 1 family protein [KO:K01091] [EC:3.1.3.18]
KS03_3269  glnA; glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
KS03_3281  glutamine synthetase, catalytic domain protein [KO:K01915] [EC:6.3.1.2]
KS03_1607  beta-eliminating lyase family protein [KO:K00600] [EC:2.1.2.1]
KS03_5596  beta-eliminating lyase family protein [KO:K00600] [EC:2.1.2.1]
KS03_1010  gcvP; glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
KS03_1012  gcvT; glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
KS03_2847  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KS03_3384  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KS03_3247  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KS03_1011  gcvH; glycine cleavage system H protein [KO:K02437]
KS03_2359  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
KS03_2358  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
KS03_2357  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
KS03_2312  glycerate kinase family protein [KO:K00865] [EC:2.7.1.165]
KS03_3626  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
KS03_1483  eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KS03_1724  bicupin, oxalate decarboxylase family protein [KO:K01569] [EC:4.1.1.2]
KS03_1790  NADH-dependent formate dehydrogenase delta subunit FdsD family protein [KO:K00126] [EC:1.17.1.9]
KS03_1791  formate dehydrogenase, alpha subunit [KO:K00123] [EC:1.17.1.9]
KS03_5051  fdnG; formate dehydrogenase-N alpha subunit [KO:K00123] [EC:1.17.1.9]
KS03_5052  molybdopterin oxidoreductase Fe4S4 domain protein [KO:K00123] [EC:1.17.1.9]
KS03_1792  NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein [KO:K00124]
KS03_5050  fdxH; formate dehydrogenase, beta subunit [KO:K00124]
KS03_1793  thioredoxin-like [2Fe-2S] ferredoxin family protein [KO:K00127]
KS03_5049  formate dehydrogenase, gamma subunit [KO:K00127]
KS03_389  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
KS03_2577  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KS03_567  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KS03_5321  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KS03_3284  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bgu00010  Glycolysis / Gluconeogenesis
bgu00020  Citrate cycle (TCA cycle)
bgu00030  Pentose phosphate pathway
bgu00053  Ascorbate and aldarate metabolism
bgu00071  Fatty acid degradation
bgu00230  Purine metabolism
bgu00250  Alanine, aspartate and glutamate metabolism
bgu00260  Glycine, serine and threonine metabolism
bgu00620  Pyruvate metabolism
bgu00710  Carbon fixation by Calvin cycle
bgu00750  Vitamin B6 metabolism
bgu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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