KEGG   PATHWAY: bhj00630
Entry
bhj00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Benincasa hispida (wax gourd)
Class
Metabolism; Carbohydrate metabolism
Pathway map
bhj00630  Glyoxylate and dicarboxylate metabolism
bhj00630

Module
bhj_M00012  Glyoxylate cycle [PATH:bhj00630]
bhj_M00532  Photorespiration [PATH:bhj00630]
bhj_M00621  Glycine cleavage system [PATH:bhj00630]
Other DBs
GO: 0046487 0043648
Organism
Benincasa hispida (wax gourd) [GN:bhj]
Gene
120087701  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
120068313  LOW QUALITY PROTEIN: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
120086652  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [KO:K01895] [EC:6.2.1.1]
120081656  acetate/butyrate--CoA ligase AAE7, peroxisomal isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
120083204  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
120092914  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
120070819  malate dehydrogenase-like isoform X1 [KO:K00025] [EC:1.1.1.37]
120070211  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
120071589  malate dehydrogenase, chloroplastic-like isoform X1 [KO:K00026] [EC:1.1.1.37]
120074607  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
120077144  LOW QUALITY PROTEIN: malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
120086860  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
120087617  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
120073411  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
120077780  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
120083208  acetyl-CoA acetyltransferase, cytosolic 1 isoform X1 [KO:K00626] [EC:2.3.1.9]
120077462  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
120083199  peroxisomal (S)-2-hydroxy-acid oxidase GLO3-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120072613  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
120085178  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
120074255  (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
120085655  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
120085656  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
120075254  catalase isozyme 3 [KO:K03781] [EC:1.11.1.6]
120069773  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
120084891  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
120085979  hydroxyphenylpyruvate reductase [KO:K15919] [EC:1.1.1.79 1.1.1.81]
120075557  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
120089098  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
120091751  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
120083818  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
120069744  glycerate dehydrogenase isoform X1 [KO:K15893] [EC:1.1.1.29]
120071250  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
120072631  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
120079068  LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
120067032  LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
65340035  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
120081663  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
120071631  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
120088725  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
120081674  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
120081935  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
120076884  glutamate--glyoxylate aminotransferase 2-like isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
120090125  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
120091265  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
120068527  glutamine synthetase cytosolic isozyme-like [KO:K01915] [EC:6.3.1.2]
120070260  glutamine synthetase cytosolic isozyme [KO:K01915] [EC:6.3.1.2]
120087112  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
120067855  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
120091845  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
120070194  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
120073835  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
120085807  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
120075860  serine hydroxymethyltransferase 2, mitochondrial [KO:K00600] [EC:2.1.2.1]
120076727  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
120083194  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
120068211  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
120068470  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
120082158  leghemoglobin reductase [KO:K00382] [EC:1.8.1.4]
120069266  glycine cleavage system H protein, mitochondrial [KO:K02437]
120082657  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
120087138  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
120091148  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
120091748  formyltetrahydrofolate deformylase 1, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
120074683  formamidase-like isoform X1 [KO:K01455] [EC:3.5.1.49]
120067301  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
120068093  oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bhj00010  Glycolysis / Gluconeogenesis
bhj00020  Citrate cycle (TCA cycle)
bhj00030  Pentose phosphate pathway
bhj00053  Ascorbate and aldarate metabolism
bhj00071  Fatty acid degradation
bhj00230  Purine metabolism
bhj00250  Alanine, aspartate and glutamate metabolism
bhj00260  Glycine, serine and threonine metabolism
bhj00620  Pyruvate metabolism
bhj00710  Carbon fixation by Calvin cycle
bhj00750  Vitamin B6 metabolism
bhj00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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