KEGG   PATHWAY: bja03440
Entry
bja03440                    Pathway                                
Name
Homologous recombination - Bradyrhizobium diazoefficiens USDA 110
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
bja03440  Homologous recombination
bja03440

Other DBs
GO: 0000724
Organism
Bradyrhizobium diazoefficiens USDA 110 [GN:bja]
Gene
blr4377  recJ; single-stranded-DNA-specific exonuclease [KO:K07462] [EC:3.1.-.-]
bll4698  ssb; single-strand DNA binding protein [KO:K03111]
bll0827  recF; DNA replication and repair protein [KO:K03629]
bll5058  bll5058; recO-like protein [KO:K03584]
bll8114  recR; recombination protein [KO:K06187]
bll5755  recA; RecA protein [KO:K03553]
blr8131  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
blr1536  ruvA; holliday junction DNA helicase [KO:K03550]
blr1537  ruvB; holliday junction DNA helicase [KO:K03551] [EC:5.6.2.4]
blr1535  ruvC; ORF_ID:blr1535; probable holliday junction nuclease [KO:K01159] [EC:3.1.21.10]
blr4603  recG; ATP-dependent DNA helicase [KO:K03655] [EC:5.6.2.4]
bll4266  bll4266; ORF_ID:bll4266; unknown protein [KO:K03581] [EC:3.1.11.5]
bll4866  dnaE; DNA polymerase III alpha chain [KO:K02337] [EC:2.7.7.7]
bll0829  dnaN; DNA polymerase III beta chain [KO:K02338] [EC:2.7.7.7]
bll8116  bll8116; DNA polymerase III tau subunit [KO:K02343] [EC:2.7.7.7]
blr0629  blr0629; ORF_ID:blr0629; hypothetical protein [KO:K02340] [EC:2.7.7.7]
bll4517  bll4517; ORF_ID:bll4517; probable DNA polymerase III delta prime subunit [KO:K02341] [EC:2.7.7.7]
blr0640  dnaQ; DNA polymerase III epsilon chain [KO:K02342] [EC:2.7.7.7]
blr4117  blr4117; ORF_ID:blr4117; putative nuclease [KO:K02342] [EC:2.7.7.7]
blr8018  blr8018; ORF_ID:blr8018; hypothetical protein [KO:K02342] [EC:2.7.7.7]
bll8083  bll8083; ORF_ID:bll8083; hypothetical protein [KO:K02342] [EC:2.7.7.7]
blr4109  blr4109; ORF_ID:blr4109; hypothetical protein [KO:K02339] [EC:2.7.7.7]
bll0445  priA; primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

DBGET integrated database retrieval system