KEGG   PATHWAY: braz00630
Entry
braz00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bradyrhizobium sp. C-145
Class
Metabolism; Carbohydrate metabolism
Pathway map
braz00630  Glyoxylate and dicarboxylate metabolism
braz00630

Module
braz_M00012  Glyoxylate cycle [PATH:braz00630]
braz_M00621  Glycine cleavage system [PATH:braz00630]
braz_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:braz00630]
Other DBs
GO: 0046487 0043648
Organism
Bradyrhizobium sp. C-145 [GN:braz]
Gene
LRP30_10105  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
LRP30_00310  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LRP30_34145  acyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
LRP30_07745  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
LRP30_17145  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
LRP30_38945  malate synthase G [KO:K01638] [EC:2.3.3.9]
LRP30_00915  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
LRP30_21840  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
LRP30_43035  citrate synthase family protein [KO:K01647] [EC:2.3.3.1]
LRP30_43040  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
LRP30_00865  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
LRP30_24080  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
LRP30_28480  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_28985  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_04185  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_05745  thiolase family protein [KO:K00626] [EC:2.3.1.9]
LRP30_39290  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_40255  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_09960  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_41180  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_41625  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_12540  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_43245  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_15830  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_16955  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_17100  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
LRP30_43240  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
LRP30_15835  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
LRP30_17400  MaoC family dehydratase N-terminal domain-containing protein [KO:K17865] [EC:4.2.1.55]
LRP30_22135  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
LRP30_23770  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
LRP30_24155  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
LRP30_30555  ATP-grasp domain-containing protein [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.3.4.14]
LRP30_13090  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
LRP30_13100  methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
LRP30_05035  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
LRP30_05045  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
LRP30_05050  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
LRP30_28810  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
LRP30_37275  catalase [KO:K03781] [EC:1.11.1.6]
LRP30_44200  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
LRP30_35650  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LRP30_38470  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LRP30_15685  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LRP30_23250  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
LRP30_16250  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LRP30_20820  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
LRP30_10865  form I ribulose bisphosphate carboxylase large subunit [KO:K01601] [EC:4.1.1.39]
LRP30_10870  ribulose bisphosphate carboxylase small subunit [KO:K01602] [EC:4.1.1.39]
LRP30_27725  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
LRP30_27730  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
LRP30_01300  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
LRP30_21800  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LRP30_22420  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
LRP30_30310  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
LRP30_42175  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
LRP30_18375  glutamine synthetase beta-grasp domain-containing protein [KO:K01915] [EC:6.3.1.2]
LRP30_22730  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LRP30_26500  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
LRP30_26490  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
LRP30_00950  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LRP30_15335  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LRP30_15820  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LRP30_21475  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
LRP30_26495  gcvH; glycine cleavage system protein GcvH [KO:K02437]
LRP30_13975  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
LRP30_41095  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
LRP30_13980  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
LRP30_13985  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
LRP30_17800  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
LRP30_39350  glycerate kinase [KO:K11529] [EC:2.7.1.165]
LRP30_16045  glycerate kinase [KO:K11529] [EC:2.7.1.165]
LRP30_34995  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
LRP30_12445  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
LRP30_16950  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LRP30_13790  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
LRP30_37465  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
LRP30_08785  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
LRP30_13800  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
LRP30_15110  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
LRP30_08780  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
LRP30_37460  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
LRP30_13805  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
LRP30_15115  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
LRP30_37455  formate dehydrogenase subunit gamma [KO:K00127]
LRP30_13810  formate dehydrogenase subunit gamma [KO:K00127]
LRP30_15120  formate dehydrogenase subunit gamma [KO:K00127]
LRP30_18305  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
LRP30_27435  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LRP30_32710  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
LRP30_01820  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
LRP30_13920  oxc; oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
braz00010  Glycolysis / Gluconeogenesis
braz00020  Citrate cycle (TCA cycle)
braz00030  Pentose phosphate pathway
braz00053  Ascorbate and aldarate metabolism
braz00071  Fatty acid degradation
braz00230  Purine metabolism
braz00250  Alanine, aspartate and glutamate metabolism
braz00260  Glycine, serine and threonine metabolism
braz00620  Pyruvate metabolism
braz00710  Carbon fixation by Calvin cycle
braz00750  Vitamin B6 metabolism
braz00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system